Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC005014.2-201ENST00000607795 599 ntBASIC2.66□□□□□ -1.98
IGHV4-28A0A0C4DH34 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.66□□□□□ -1.98
IGHV4-28A0A0C4DH34 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.66□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC233263.6-201ENST00000631132 1963 ntBASIC2.66□□□□□ -1.98
IGHV4-28A0A0C4DH34 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
IGHV4-28A0A0C4DH34 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC2.66□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC004944.1-201ENST00000517807 3059 ntBASIC2.66□□□□□ -1.98
IGHV4-28A0A0C4DH34 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
IGHV4-28A0A0C4DH34 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC106871.1-201ENST00000568324 3102 ntBASIC2.65□□□□□ -1.98
IGHV4-28A0A0C4DH34 AC006504.1-201ENST00000562493 3666 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 MTND5P9-201ENST00000503854 1755 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNORD50.1-201ENST00000362987 71 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 snosnR66.1-201ENST00000391095 99 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 BTF3L4P2-201ENST00000392798 346 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNA5SP44-201ENST00000410446 133 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AP000275.1-201ENST00000411943 390 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 ATP5A1P2-201ENST00000412323 255 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 RPS29P4-201ENST00000414733 161 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 EIF4EP2-201ENST00000422816 654 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC091286.1-201ENST00000431233 461 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 SETP5-201ENST00000437270 562 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL035666.1-201ENST00000446195 348 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC012308.1-201ENST00000451232 178 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNORA31.23-201ENST00000517219 133 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC008739.3-201ENST00000603262 127 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC019159.1-201ENST00000605094 187 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 BRDTP1-201ENST00000605735 677 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNORA51-201ENST00000606420 132 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU1-30P-201ENST00000606575 163 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC024581.2-201ENST00000619986 252 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC119674.1-207ENST00000641355 633 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL021368.2-201ENST00000606125 5352 ntBASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
IGHV4-28A0A0C4DH34 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 MFSD8-236ENST00000641509 4050 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC009541.1-201ENST00000438279 2662 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 Y_RNA.28-201ENST00000362554 111 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU1-18P-201ENST00000363062 164 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNY1P16-201ENST00000363063 111 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 Y_RNA.148-201ENST00000363557 117 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 Y_RNA.252-201ENST00000364556 101 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNORA14A-201ENST00000364773 135 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNORA33.2-201ENST00000365413 134 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 Y_RNA.496-201ENST00000384444 101 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR449B-201ENST00000384995 97 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL138878.1-201ENST00000405131 347 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 NUP35P1-201ENST00000422734 947 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 MRPS18CP6-201ENST00000423587 223 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC018865.2-201ENST00000423631 129 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 PTGES3P4-201ENST00000426243 356 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 SNRPGP7-201ENST00000469016 106 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 RPL17P19-201ENST00000489069 552 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU5F-8P-201ENST00000515941 111 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 RNU6-988P-201ENST00000519081 107 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC074050.1-201ENST00000563247 211 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC091152.3-201ENST00000604227 325 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL360085.1-201ENST00000604713 532 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AL391261.4-201ENST00000616012 481 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC007485.1-201ENST00000616755 206 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 U6.98-201ENST00000637157 84 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 MIR3529-201ENST00000637713 78 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC009093.8-201ENST00000641769 292 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 AC010889.1-201ENST00000566193 2666 ntBASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.64□□□□□ -1.99
IGHV4-28A0A0C4DH34 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms