Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC130324.3-201ENST00000614165 542 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AL359314.1-201ENST00000616913 261 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AC091965.5-201ENST00000624785 342 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AC092192.1-201ENST00000633154 1018 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 RNU11-3P-201ENST00000391111 133 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 RNA5SP465-201ENST00000391195 109 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AL627390.1-201ENST00000396055 340 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 RNU2-32P-201ENST00000411193 191 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC009518.2-201ENST00000418056 731 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 HMGB1P18-201ENST00000438801 619 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC093899.1-201ENST00000457984 376 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AL139824.2-201ENST00000458731 1095 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC098862.1-201ENST00000504991 413 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 RNU6-914P-201ENST00000516749 109 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 RNU6-677P-201ENST00000516914 101 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AP005660.1-201ENST00000522972 293 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AP003392.2-201ENST00000527269 208 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC013828.2-201ENST00000532487 235 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC135279.1-201ENST00000543493 504 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 MIR3683-201ENST00000580847 82 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 VN1R82P-201ENST00000601481 356 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 CLIC4P2-201ENST00000601934 717 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AP000942.3-201ENST00000603702 160 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 BCRP9-201ENST00000605312 388 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC098614.4-201ENST00000607601 462 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC091965.4-201ENST00000607691 587 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AC092656.1-203ENST00000624134 423 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 AL138960.2-201ENST00000625145 535 ntBASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
USH1CQ9Y6N9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AC092104.1-201ENST00000497346 1441 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 Y_RNA.33-201ENST00000362591 102 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 RNU6-1010P-201ENST00000362757 107 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 SMIM11P1-201ENST00000369586 178 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 MIR934-201ENST00000401241 83 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 MIR1262-201ENST00000408276 93 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 UBE2V1P10-201ENST00000414685 269 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AC245102.2-201ENST00000448956 180 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 SNORD97-201ENST00000459187 142 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AC109927.2-201ENST00000506416 303 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AC008269.2-201ENST00000561915 1105 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AC022254.1-201ENST00000567857 235 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 BNIP3P30-201ENST00000601184 574 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 KC877982.1-201ENST00000602313 470 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AC103810.8-201ENST00000607347 118 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 AC004908.3-201ENST00000610248 625 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 uc_338.15-201ENST00000615470 191 ntBASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
USH1CQ9Y6N9 RNA5SP190-201ENST00000365222 118 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 RNY3P13-201ENST00000365542 102 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 RNU6-1274P-201ENST00000384557 107 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 SNORA40.4-201ENST00000390971 128 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 RNA5SP213-201ENST00000391031 106 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 RNU2-48P-201ENST00000410694 191 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AC003071.1-201ENST00000451219 789 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 PRELID3BP1-201ENST00000457142 540 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 RPS29P23-201ENST00000458635 123 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AP004247.1-201ENST00000531556 1289 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AC068587.4-201ENST00000533893 186 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AC092325.1-201ENST00000566449 554 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 MIR1273C-201ENST00000578669 77 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 FRG1KP-201ENST00000623592 341 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 MIR3529-201ENST00000637713 78 ntBASIC1.43□□□□□ -2.18
USH1CQ9Y6N9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms