Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.52□□□□□ -1.85
PCDHGA9Q9Y5G4 MTND5P10-201ENST00000603719 1809 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 KPNA2P1-201ENST00000458289 1591 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 AC010889.1-201ENST00000566193 2666 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 AC032011.1-201ENST00000611703 1549 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 Y_RNA.146-201ENST00000363549 102 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-799P-201ENST00000363567 107 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-1317P-201ENST00000364582 104 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-336P-201ENST00000364891 107 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-843P-201ENST00000384454 104 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR767-201ENST00000390228 109 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU1-101P-201ENST00000391171 127 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-612P-201ENST00000516909 102 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 AP000889.1-201ENST00000530968 660 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 AL442663.2-201ENST00000554385 511 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 MTND4LP32-201ENST00000636111 270 ntBASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA9Q9Y5G4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-227P-201ENST00000362865 103 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-428P-201ENST00000362942 107 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 RNA5SP390-201ENST00000410191 113 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 Y_RNA.594-201ENST00000410373 140 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 AL133396.1-201ENST00000432048 687 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 AC236972.1-201ENST00000433225 199 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 CYCSP35-201ENST00000451978 304 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 ELOCP24-201ENST00000456370 334 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 AC097473.1-201ENST00000508142 408 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU5B-3P-201ENST00000516601 115 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 SNORA31.18-201ENST00000517043 134 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 HPRT1P3-201ENST00000539521 576 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR3200-201ENST00000580767 85 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR4273-201ENST00000582824 84 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 AC019159.1-201ENST00000605094 187 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU1-30P-201ENST00000606575 163 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 AL669831.3-213ENST00000636676 183 ntBASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA9Q9Y5G4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC103988.1-201ENST00000566382 2177 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 RNA5SP51-201ENST00000364750 119 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 SNORD116-29-201ENST00000384516 83 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 RNU6-306P-201ENST00000384617 107 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 BTF3L4P2-201ENST00000392798 346 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR1302-11-201ENST00000408051 138 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR1302-9-201ENST00000408365 138 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR1302-10-201ENST00000408734 138 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 USMG5P1-201ENST00000425964 177 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 USP9YP30-201ENST00000430729 455 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 RPL21P23-201ENST00000446654 460 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 RPL30P15-201ENST00000457129 321 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC097462.2-201ENST00000504623 481 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 Y_RNA.701-201ENST00000516812 110 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC022695.1-201ENST00000522089 237 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC078795.3-201ENST00000602913 472 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC091152.3-201ENST00000604227 325 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 MIR1302-2-201ENST00000607096 138 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC009229.3-201ENST00000608056 282 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 AC090971.5-201ENST00000621102 293 ntBASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA9Q9Y5G4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms