Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 RNU5A-1-201ENST00000362698 116 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 RNA5SP42-201ENST00000364278 115 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 RN7SKP111-201ENST00000410349 271 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 UBE2V1P4-201ENST00000425374 344 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 USMG5P1-201ENST00000425964 177 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 AC079780.1-201ENST00000428259 207 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 RPL12P25-201ENST00000455592 494 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 AC084357.1-201ENST00000473404 255 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 AC006483.1-201ENST00000487308 313 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 RPS15AP34-201ENST00000487776 387 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 AC092436.3-201ENST00000511788 257 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-470P-201ENST00000515954 104 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 COX6CP5-201ENST00000527162 228 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 FAM60BP-201ENST00000578364 658 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 MIR548AC-201ENST00000585049 88 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 NUTF2P8-201ENST00000604593 363 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 AC087588.2-201ENST00000617667 426 ntBASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTDP1Q9Y5B0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 MAPK10-322ENST00000641485 4530 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 Y_RNA.2-201ENST00000362330 96 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-490P-201ENST00000362985 107 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 RNY1P14-201ENST00000384426 108 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 SNORA1.3-201ENST00000384676 136 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 RNU1-101P-201ENST00000391171 127 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC063979.1-201ENST00000415539 377 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 MTCO1P39-201ENST00000426148 480 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 USP9YP30-201ENST00000430729 455 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AL645568.3-201ENST00000433683 316 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 RPL23AP50-201ENST00000434149 455 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 SNORD5.1-201ENST00000458800 75 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 HSPE1P6-201ENST00000479457 291 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC110794.1-201ENST00000505816 425 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-764P-201ENST00000516396 105 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-699P-201ENST00000517081 110 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC093331.1-201ENST00000521474 169 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC008269.2-201ENST00000561915 1105 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC011494.1-201ENST00000596454 237 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC006006.1-201ENST00000603082 144 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC034102.8-201ENST00000615146 484 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AL138880.2-201ENST00000616214 239 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AL031601.2-202ENST00000622650 282 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 PWAR6-201ENST00000552334 4618 ntBASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.93□□□□□ -1.78
CTDP1Q9Y5B0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 Y_RNA.527-201ENST00000384573 102 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-331P-201ENST00000384724 107 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 MIR578-201ENST00000384828 96 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 SAR1AP2-201ENST00000392696 594 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 RPL27AP8-201ENST00000424277 446 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 AC091390.3-201ENST00000426478 338 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 MTCYBP9-201ENST00000431021 303 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 MTATP8P1-201ENST00000467115 207 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 AL049874.1-201ENST00000489560 388 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 AC015911.1-201ENST00000495111 156 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 MTND3P25-201ENST00000509243 135 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-927P-201ENST00000516199 100 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 SCARNA16.2-201ENST00000516520 172 ntBASIC3.92□□□□□ -1.78
CTDP1Q9Y5B0 SNORA70.19-201ENST00000516717 90 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms