Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 BX510359.4-201ENST00000423750 193 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 USP9YP15-201ENST00000442391 422 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 MTND1P12-201ENST00000455231 147 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 AC092436.1-201ENST00000506450 503 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 Y_RNA.689-201ENST00000516589 107 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 MIR4285-201ENST00000581001 85 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 CLIC4P2-201ENST00000601934 717 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 AC012065.4-201ENST00000602445 679 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 AL022345.1-201ENST00000607292 135 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 AC012360.2-201ENST00000609349 391 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 AL355816.2-201ENST00000610049 647 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 AC007792.1-201ENST00000623023 402 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 AC002543.1-201ENST00000299783 1954 ntBASIC1.58□□□□□ -2.16
RHBDD3Q9Y3P4 ZNF876P-202ENST00000398732 1485 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AL356292.1-201ENST00000283110 373 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 RNU4-42P-201ENST00000364738 142 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 SNORA75B-201ENST00000384053 137 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 RPL23AP30-201ENST00000432419 501 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AC003989.2-201ENST00000440224 169 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 EXOSC3P1-201ENST00000448649 500 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 PPP1R2P5-201ENST00000457256 603 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 RNU7-51P-201ENST00000516560 62 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AC110588.1-201ENST00000559699 137 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 MIR3122-201ENST00000577243 73 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 WISP1-OT1-201ENST00000602893 642 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AC006338.1-201ENST00000618453 749 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AP002371.2-201ENST00000624450 503 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AC103706.2-201ENST00000638080 240 ntBASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RHBDD3Q9Y3P4 AC073343.1-201ENST00000328239 651 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 MIR30A-201ENST00000385092 71 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AC092809.3-201ENST00000415453 231 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 MTCO2P21-201ENST00000419780 677 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AP001025.1-201ENST00000486139 332 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 RNU1-41P-201ENST00000516161 162 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 RNU1-48P-201ENST00000516400 162 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AP003122.4-201ENST00000530980 758 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AC135279.1-201ENST00000543493 504 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AC123904.2-201ENST00000548059 300 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AC025678.1-201ENST00000567861 338 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 MIR4419B-201ENST00000577260 68 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 Z82243.1-201ENST00000609432 473 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AC108747.1-201ENST00000609508 535 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AC021755.4-201ENST00000616620 456 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 AL445523.1-201ENST00000451184 1362 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 ZNF680P1-201ENST00000436625 1469 ntBASIC1.56□□□□□ -2.16
RHBDD3Q9Y3P4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 CBX3P1-201ENST00000325243 554 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 MIR9-3-201ENST00000385084 90 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 RPS20P2-201ENST00000402520 389 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 RNU6-1140P-201ENST00000410517 106 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 RNA5SP501-201ENST00000410990 112 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 AC092648.1-201ENST00000425870 423 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 CBX3P6-201ENST00000430257 527 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 RPL32P28-201ENST00000443577 397 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 FAM206BP-201ENST00000510179 541 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 AC107393.1-201ENST00000512403 346 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 AC022880.1-201ENST00000534017 973 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 AC007375.1-201ENST00000554513 578 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 MTCYBP33-201ENST00000575007 1130 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 AC024614.2-201ENST00000577584 372 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 MIR4509-3-201ENST00000578671 94 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 AP001004.1-201ENST00000582468 324 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 MIR4509-2-201ENST00000583920 94 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 AC010900.2-201ENST00000604508 210 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 MIR4509-1-201ENST00000618224 94 ntBASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.55□□□□□ -2.16
RHBDD3Q9Y3P4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RHBDD3Q9Y3P4 SNORD114-1-201ENST00000362705 72 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms