Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 snoU13.14-201ENST00000459372 104 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AP001025.1-201ENST00000486139 332 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AC010587.1-201ENST00000505809 469 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 SNORA31.23-201ENST00000517219 133 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AP003392.2-201ENST00000527269 208 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AP005639.2-201ENST00000527592 928 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 TMF1P1-201ENST00000576058 373 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AC090897.2-201ENST00000581715 130 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AL031775.1-201ENST00000607014 887 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AL078595.3-201ENST00000623815 1166 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 AC006927.3-201ENST00000638789 384 ntBASIC1.6□□□□□ -2.15
RCL1Q9Y2P8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 RNA5SP289-201ENST00000362332 137 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 RNU6-1274P-201ENST00000384557 107 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 MIR29B2-201ENST00000385055 81 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 RNU6-584P-201ENST00000410350 95 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AC074117.2-201ENST00000417130 397 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 EIF1AXP1-201ENST00000419267 435 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AL590365.1-201ENST00000450788 243 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 RPL23AP94-201ENST00000512518 302 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 RNU6-123P-201ENST00000516163 102 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 IGKV3-31-201ENST00000523109 329 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AC022616.8-201ENST00000533569 253 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 MIR5089-201ENST00000580047 84 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 BNIP3P25-201ENST00000596023 559 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 Y_RNA.783-201ENST00000613546 102 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 AC007792.1-201ENST00000623023 402 ntBASIC1.59□□□□□ -2.15
RCL1Q9Y2P8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
RCL1Q9Y2P8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 RNU5F-6P-201ENST00000362979 116 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 XGY1-201ENST00000381172 446 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 RNU6-1179P-201ENST00000384667 107 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 CISD1P1-201ENST00000393907 327 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 Y_RNA.608-201ENST00000410647 95 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 RN7SKP284-201ENST00000411002 343 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 SRIP3-201ENST00000413200 219 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AL365184.2-201ENST00000431139 435 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 RPS24P1-201ENST00000438550 371 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 USP9YP15-201ENST00000442391 422 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 PPP1R2P5-201ENST00000457256 603 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC117522.1-201ENST00000509821 380 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC108078.2-201ENST00000510750 236 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 Y_RNA.687-201ENST00000516558 91 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 SNORA43.2-201ENST00000516652 128 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 DUXAP5-201ENST00000529668 529 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC018630.3-201ENST00000542637 96 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 SNRPGP18-201ENST00000553000 214 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 DEFB131E-202ENST00000602581 683 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC012360.2-201ENST00000609349 391 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC104010.1-201ENST00000616889 150 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AL132822.1-201ENST00000617063 513 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC092140.2-201ENST00000618027 521 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 MIR6873-201ENST00000622788 63 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 OR4G3P-201ENST00000633500 913 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AC002543.1-201ENST00000299783 1954 ntBASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RCL1Q9Y2P8 AL354685.2-201ENST00000448218 1447 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 SNORD115-3-201ENST00000363100 82 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 RNU4-1-201ENST00000363925 141 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 RAP1BP3-201ENST00000407180 549 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 MIR1283-2-201ENST00000408621 87 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 RNU4-53P-201ENST00000410828 140 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 AL135786.1-201ENST00000415892 214 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 AC114491.1-201ENST00000416095 246 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 EIF4EP2-201ENST00000422816 654 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 TOMM20P4-201ENST00000427861 435 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 MED13P1-201ENST00000428342 171 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 PRELID3BP1-201ENST00000457142 540 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 SNORD11.1-201ENST00000459482 85 ntBASIC1.57□□□□□ -2.16
RCL1Q9Y2P8 RPL21P99-201ENST00000480369 423 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms