Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC5.24□□□□□ -1.57
ZC3H4Q9UPT8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.24□□□□□ -1.57
ZC3H4Q9UPT8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ZC3H4Q9UPT8 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ZC3H4Q9UPT8 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ZC3H4Q9UPT8 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ZC3H4Q9UPT8 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ZC3H4Q9UPT8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.24□□□□□ -1.57
ZC3H4Q9UPT8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ZC3H4Q9UPT8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.398-201ENST00000383952 99 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 MIR1290-201ENST00000408735 78 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AL590383.1-201ENST00000428602 75 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 snoU13.4-201ENST00000458916 104 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AP001324.2-201ENST00000461163 319 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AP001025.1-201ENST00000486139 332 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 RPL30P1-201ENST00000488676 339 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AC091959.1-201ENST00000495857 238 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 BTF3L4P4-201ENST00000506381 449 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 MIR4782-201ENST00000577987 79 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 MIR5695-201ENST00000579717 85 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AC004825.2-201ENST00000616634 455 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AL138721.1-201ENST00000616756 179 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AC005086.4-201ENST00000623065 213 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.82-201ENST00000363000 102 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.92-201ENST00000363043 102 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.235-201ENST00000364412 102 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.306-201ENST00000365015 102 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.308-201ENST00000365043 101 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.312-201ENST00000365089 102 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.322-201ENST00000365151 102 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 RNU6-1286P-201ENST00000383871 107 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 NDUFB4P7-201ENST00000423198 363 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 EIF4HP2-201ENST00000424380 563 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.650-201ENST00000459002 102 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 RNY3P16-201ENST00000516338 101 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.777-201ENST00000516982 102 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.771-201ENST00000598668 102 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AC005296.1-201ENST00000616145 209 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.789-201ENST00000622480 102 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AC048347.1-201ENST00000624621 427 ntBASIC5.23□□□□□ -1.57
ZC3H4Q9UPT8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 AP000542.2-201ENST00000623199 6179 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 AC015813.6-201ENST00000624409 5808 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 RNU6-50P-201ENST00000362356 103 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 RNU1-83P-201ENST00000363426 164 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 Y_RNA.240-201ENST00000364469 95 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 RNU6-1289P-201ENST00000384431 106 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 MTCO1P5-201ENST00000433573 344 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 AC117440.1-201ENST00000474107 571 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 MRPS18CP4-201ENST00000535821 231 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 AL021997.2-201ENST00000615674 271 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 AL365265.1-201ENST00000621045 234 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 AC006001.4-201ENST00000622243 395 ntBASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ZC3H4Q9UPT8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
ZC3H4Q9UPT8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
ZC3H4Q9UPT8 MAPK10-320ENST00000641462 6696 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 SNORD115-32-201ENST00000364079 82 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 RNA5SP72-201ENST00000364442 117 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 RNU6-918P-201ENST00000391219 106 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 RNU1-139P-201ENST00000391307 165 ntBASIC5.21□□□□□ -1.58
ZC3H4Q9UPT8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms