Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 BTF3P12-201ENST00000519620 469 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 MIR548AC-201ENST00000585049 88 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC092747.3-201ENST00000603769 301 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 CTHRC1P1-201ENST00000605383 469 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC107294.3-201ENST00000609211 526 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC022418.1-201ENST00000624118 445 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC073476.4-201ENST00000628409 72 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 MTND4P12-201ENST00000498999 1377 ntBASIC3.59□□□□□ -1.83
HDAC9Q9UKV0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.59□□□□□ -1.84
HDAC9Q9UKV0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 Y_RNA.166-201ENST00000363730 102 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 RNU6-217P-201ENST00000384164 104 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 RPL21P90-201ENST00000415692 466 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 AL365496.1-201ENST00000426885 215 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 AL714022.1-201ENST00000439897 151 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 HMGB3P8-201ENST00000449709 577 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 RNU7-23P-201ENST00000459465 62 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 AC008413.1-201ENST00000511864 177 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 RNU6-189P-201ENST00000516120 101 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 VN1R80P-201ENST00000597126 338 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 RPL23AP78-201ENST00000599928 470 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 AC012119.1-201ENST00000603184 222 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 AC096644.4-201ENST00000563417 2912 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 ZNF519P1-201ENST00000449011 1626 ntBASIC3.58□□□□□ -1.84
HDAC9Q9UKV0 Y_RNA.373-201ENST00000365600 103 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 RNU6-831P-201ENST00000384548 107 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 RNA5SP219-201ENST00000390940 113 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 RNU2-41P-201ENST00000410991 178 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 USP9YP20-201ENST00000419224 558 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 RPL23AP58-201ENST00000440453 469 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 RPL7P12-201ENST00000446719 750 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 SNORA64.4-201ENST00000516632 81 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 RNA5SP165-201ENST00000517142 115 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 AC009902.1-201ENST00000519351 183 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 AC087241.2-201ENST00000535801 324 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 AC004805.2-201ENST00000605382 482 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 AL357078.3-201ENST00000607528 618 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 Z82243.1-201ENST00000609432 473 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 U2.17-201ENST00000611454 95 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 AC110079.1-202ENST00000635213 138 ntBASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.57□□□□□ -1.84
HDAC9Q9UKV0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC073325.2-201ENST00000339545 159 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 RNU1-105P-201ENST00000363470 161 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 SNORD56.3-201ENST00000363507 71 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 RNU6-395P-201ENST00000365662 106 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 SNORA32.2-201ENST00000384049 122 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 RNU6-140P-201ENST00000384566 108 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 Y_RNA.530-201ENST00000384587 101 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 RNU6-1009P-201ENST00000390996 107 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC087499.2-201ENST00000432861 149 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 SNRPEP9-201ENST00000436794 238 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 IFNA20P-201ENST00000436840 528 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC125238.1-201ENST00000448842 249 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC139453.3-201ENST00000493276 369 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 RNU4-49P-201ENST00000516080 140 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 RNU1-143P-201ENST00000516296 146 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AP002770.2-201ENST00000543613 532 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC091135.1-201ENST00000585943 307 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC005261.5-201ENST00000596280 355 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC007938.3-201ENST00000604965 623 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 AC004832.5-201ENST00000608677 401 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 U1.23-201ENST00000610293 146 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 Y_RNA.804-201ENST00000615262 101 ntBASIC3.56□□□□□ -1.84
HDAC9Q9UKV0 RNU1-68P-201ENST00000615382 146 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms