Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.3□□□□□ -1.72
USP35Q9P2H5 AL139095.1-201ENST00000404326 391 ntBASIC4.3□□□□□ -1.72
USP35Q9P2H5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.3□□□□□ -1.72
USP35Q9P2H5 MRPL42P6-201ENST00000486397 371 ntBASIC4.3□□□□□ -1.72
USP35Q9P2H5 GZMAP1-201ENST00000503054 631 ntBASIC4.3□□□□□ -1.72
USP35Q9P2H5 MRPS36P2-201ENST00000512569 299 ntBASIC4.3□□□□□ -1.72
USP35Q9P2H5 AC114781.4-201ENST00000513707 639 ntBASIC4.3□□□□□ -1.72
USP35Q9P2H5 AC091826.1-201ENST00000514065 313 ntBASIC4.3□□□□□ -1.72
USP35Q9P2H5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.3□□□□□ -1.72
USP35Q9P2H5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.3□□□□□ -1.72
USP35Q9P2H5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.3□□□□□ -1.72
USP35Q9P2H5 AC008121.1-201ENST00000603244 268 ntBASIC4.3□□□□□ -1.72
USP35Q9P2H5 RNU6-91P-201ENST00000607774 107 ntBASIC4.3□□□□□ -1.72
USP35Q9P2H5 uc_338.14-201ENST00000613162 166 ntBASIC4.3□□□□□ -1.72
USP35Q9P2H5 HAUS6P2-201ENST00000433254 2404 ntBASIC4.3□□□□□ -1.72
USP35Q9P2H5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.29□□□□□ -1.72
USP35Q9P2H5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP35Q9P2H5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP35Q9P2H5 FTH1P15-201ENST00000406984 280 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 AL365400.1-201ENST00000431854 640 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 AL357552.1-201ENST00000445254 415 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.29□□□□□ -1.72
USP35Q9P2H5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP35Q9P2H5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.29□□□□□ -1.72
USP35Q9P2H5 RNU5F-8P-201ENST00000515941 111 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 RNU6-1069P-201ENST00000516612 133 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 AC109479.2-201ENST00000517842 174 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP35Q9P2H5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.29□□□□□ -1.72
USP35Q9P2H5 RPL7P20-201ENST00000520308 745 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.29□□□□□ -1.72
USP35Q9P2H5 AC009163.5-201ENST00000575421 637 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 APOOP1-201ENST00000604695 592 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 ATP1B3P1-201ENST00000605365 821 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 AL157817.1-201ENST00000614264 790 ntBASIC4.29□□□□□ -1.72
USP35Q9P2H5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.29□□□□□ -1.72
USP35Q9P2H5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.29□□□□□ -1.72
USP35Q9P2H5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.29□□□□□ -1.72
USP35Q9P2H5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
USP35Q9P2H5 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP35Q9P2H5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.28□□□□□ -1.72
USP35Q9P2H5 DYNLT3P1-201ENST00000378574 347 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 RNU6-1083P-201ENST00000384022 107 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 RPL21P3-201ENST00000395517 478 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 AC022018.1-201ENST00000430685 241 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.28□□□□□ -1.72
USP35Q9P2H5 AC146507.2-201ENST00000460608 476 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 AC107626.1-201ENST00000471084 183 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 GLYCAM1-201ENST00000546596 285 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 BNIP3P25-201ENST00000596023 559 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 AL670379.10-201ENST00000604330 253 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 AL670379.9-201ENST00000605428 253 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.28□□□□□ -1.72
USP35Q9P2H5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
USP35Q9P2H5 AC011890.2-201ENST00000613393 294 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.28□□□□□ -1.72
USP35Q9P2H5 MIR3529-201ENST00000637713 78 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP35Q9P2H5 AL136360.1-201ENST00000503377 1900 ntBASIC4.28□□□□□ -1.72
USP35Q9P2H5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP35Q9P2H5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP35Q9P2H5 RNU5E-7P-201ENST00000365290 117 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 RNU6-332P-201ENST00000391193 108 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 EEF1A1P41-201ENST00000414667 207 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.27□□□□□ -1.73
USP35Q9P2H5 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.27□□□□□ -1.73
USP35Q9P2H5 RNU7-138P-201ENST00000459479 64 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 Y_RNA.665-201ENST00000516177 98 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 SNORA43.2-201ENST00000516652 128 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 COPS8P3-201ENST00000526024 482 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 MIR2682-201ENST00000580305 110 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 MIR4506-201ENST00000584693 77 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.27□□□□□ -1.73
USP35Q9P2H5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.27□□□□□ -1.73
USP35Q9P2H5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP35Q9P2H5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP35Q9P2H5 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.27□□□□□ -1.73
USP35Q9P2H5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.27□□□□□ -1.73
USP35Q9P2H5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP35Q9P2H5 AC138915.1-201ENST00000565427 1685 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.26□□□□□ -1.73
USP35Q9P2H5 SNORA68.1-201ENST00000364537 132 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 RNU6-487P-201ENST00000365430 104 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 SNORD21-201ENST00000383953 95 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 MIR147B-201ENST00000390185 80 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.26□□□□□ -1.73
USP35Q9P2H5 MTND1P2-201ENST00000430604 821 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 NFU1P2-201ENST00000448700 469 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.26□□□□□ -1.73
USP35Q9P2H5 AC087884.1-201ENST00000469738 328 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 MED28P2-201ENST00000475771 317 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 SNORA19.2-201ENST00000516013 114 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 RNU5B-3P-201ENST00000516601 115 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 AC087854.1-201ENST00000519706 414 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 MIR3162-201ENST00000581818 82 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.26□□□□□ -1.73
USP35Q9P2H5 AC006504.8-201ENST00000621046 635 ntBASIC4.26□□□□□ -1.73
USP35Q9P2H5 AC138627.2-201ENST00000624202 601 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms