Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RPS29P13-201ENST00000402041 169 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AC007098.1-201ENST00000420122 367 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 SNORA71B-202ENST00000439232 272 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AL500522.2-201ENST00000448562 343 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 RPL37P4-201ENST00000448908 268 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 HMGB3P8-201ENST00000449709 577 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 HMGN2P7-201ENST00000456186 273 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 SNORA84-201ENST00000459229 133 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 RPS4XP13-201ENST00000483219 789 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 RPL22P13-201ENST00000493291 347 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 RNU6-928P-201ENST00000516876 104 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 SNORA31.18-201ENST00000517043 134 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AC144568.1-201ENST00000520139 137 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AC131281.1-201ENST00000522984 164 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AP004607.1-201ENST00000524456 203 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AC040926.1-201ENST00000530195 238 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 MIR5701-3-201ENST00000578890 82 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 MIR5701-1-201ENST00000585138 82 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AC016727.2-201ENST00000603988 621 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AL137849.1-201ENST00000604767 169 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 MIR5701-2-201ENST00000615634 82 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AC034229.5-201ENST00000624258 185 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 FAM35BP-202ENST00000497389 3337 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 AC022336.2-201ENST00000568966 2538 ntBASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KCMF1Q9P0J7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC090740.1-201ENST00000623193 2262 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 RNU6-527P-201ENST00000363425 104 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 Y_RNA.210-201ENST00000364161 110 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 RNU6-702P-201ENST00000364982 107 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 Y_RNA.380-201ENST00000365663 111 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 MIR518D-201ENST00000385014 87 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 HLFP1-201ENST00000402375 499 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 RNA5SP494-201ENST00000410653 129 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 RPL26P27-201ENST00000414397 437 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC114482.1-201ENST00000418010 247 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AL445584.1-201ENST00000431451 330 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC098831.1-201ENST00000440661 216 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AL731563.1-201ENST00000442202 214 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC079354.2-201ENST00000453523 154 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 RN7SL93P-201ENST00000463035 293 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 RPL23AP49-201ENST00000492925 468 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 RNA5SP164-201ENST00000516533 110 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 SNORA40.14-201ENST00000516543 86 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 SNORA43.2-201ENST00000516652 128 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC022695.1-201ENST00000522089 237 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC110588.1-201ENST00000559699 137 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AL355297.3-201ENST00000604082 446 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 Z98751.3-201ENST00000604447 521 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 SNORA62.6-201ENST00000606322 83 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AL391261.4-201ENST00000616012 481 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC048347.1-201ENST00000624621 427 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 MTND5P27-201ENST00000428871 1720 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 SRP72P2-201ENST00000344851 1979 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 AC032011.1-201ENST00000611703 1549 ntBASIC3.6□□□□□ -1.83
KCMF1Q9P0J7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 RNU1-18P-201ENST00000363062 164 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 RNU6-105P-201ENST00000363909 104 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 SNORA62.3-201ENST00000365110 153 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 SNORA48.7-201ENST00000391302 135 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 RNU6ATAC-201ENST00000408749 126 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 MIR1252-201ENST00000408861 65 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AC007389.2-201ENST00000434630 306 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 RPL21P2-201ENST00000440049 481 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 RPS3AP12-201ENST00000443616 753 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 HMGN2P16-201ENST00000456802 261 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 RNA5SP310-201ENST00000459084 116 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 Y_RNA.715-201ENST00000517082 110 ntBASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.59□□□□□ -1.83
KCMF1Q9P0J7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms