Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.35□□□□□ -1.87
EHD3Q9NZN3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 RNU6-490P-201ENST00000362985 107 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AP002088.1-201ENST00000382740 395 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 RNU6-1032P-201ENST00000384100 107 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 RNU6-166P-201ENST00000384371 107 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 RNU6-790P-201ENST00000384479 105 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 MIR10A-201ENST00000385043 110 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 RNU6-1106P-201ENST00000390845 107 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 SNORA40C-201ENST00000391285 128 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 MRPL42P3-201ENST00000401492 326 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AL096701.2-201ENST00000416920 238 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 DBIP2-201ENST00000419076 262 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 CYCSP4-201ENST00000429682 331 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AL133396.1-201ENST00000432048 687 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 RPL23AP50-201ENST00000434149 455 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 Z82210.1-201ENST00000440037 231 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AL357552.1-201ENST00000445254 415 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AL133547.1-201ENST00000448546 220 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AL031274.1-201ENST00000450334 232 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AC008571.1-201ENST00000467232 300 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 RN7SKP18-201ENST00000516005 275 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 RNU6-572P-201ENST00000516724 80 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 Y_RNA.720-201ENST00000517166 92 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 MIR4680-201ENST00000580906 66 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AL034408.1-202ENST00000636088 415 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AC012442.3-202ENST00000636742 206 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 AL513302.2-201ENST00000562313 1842 ntBASIC3.34□□□□□ -1.87
EHD3Q9NZN3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
EHD3Q9NZN3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
EHD3Q9NZN3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
EHD3Q9NZN3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
EHD3Q9NZN3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
EHD3Q9NZN3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
EHD3Q9NZN3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 MTND5P16-201ENST00000460269 1703 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 MIR30E-201ENST00000362104 92 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 Y_RNA.364-201ENST00000365532 101 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 U3.42-201ENST00000408746 214 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 RNA5SP129-201ENST00000410276 118 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 RNU2-68P-201ENST00000410878 191 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 AC096664.2-201ENST00000411843 406 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 SNORD56-201ENST00000413522 71 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 BX276092.3-201ENST00000424182 230 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 AC007560.1-201ENST00000426912 237 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 AL627311.1-201ENST00000431514 115 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 AC092573.2-201ENST00000434546 243 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 NDUFB1P2-201ENST00000449477 176 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 GSTA11P-201ENST00000452866 669 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 RPL12P25-201ENST00000455592 494 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 MTND5P22-201ENST00000458380 195 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 AC092798.1-201ENST00000458542 409 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 RPL21P13-201ENST00000488305 481 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 MIR3976-201ENST00000606807 139 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 U4.6-201ENST00000621618 127 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 Z69720.2-201ENST00000624755 279 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 ZNF807-201ENST00000328088 1707 ntBASIC3.33□□□□□ -1.88
EHD3Q9NZN3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.33□□□□□ -1.88
EHD3Q9NZN3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
EHD3Q9NZN3 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 Y_RNA.48-201ENST00000362710 103 ntBASIC3.32□□□□□ -1.88
EHD3Q9NZN3 Y_RNA.158-201ENST00000363651 101 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms