Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
DDX56Q9NY93 Z75746.1-201ENST00000440243 2080 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
DDX56Q9NY93 OR56A5-201ENST00000340110 738 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 RNU6-845P-201ENST00000362578 103 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 Y_RNA.212-201ENST00000364177 102 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
DDX56Q9NY93 AL359837.1-201ENST00000381357 287 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 MTND3P8-201ENST00000412909 339 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 NDUFB4P5-201ENST00000415445 361 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 AL139396.1-201ENST00000421137 167 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX56Q9NY93 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.56□□□□□ -1.84
DDX56Q9NY93 AC005019.1-201ENST00000436455 431 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 RPS15AP7-201ENST00000439294 405 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX56Q9NY93 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX56Q9NY93 AC112771.1-201ENST00000463581 102 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 AP001025.1-201ENST00000486139 332 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 AC092436.3-201ENST00000511788 257 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 RNU1-95P-201ENST00000516357 160 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 RNU1-128P-201ENST00000516704 160 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
DDX56Q9NY93 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
DDX56Q9NY93 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX56Q9NY93 AC005668.1-201ENST00000571142 476 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 MIR3672-201ENST00000584290 82 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 UBE2V2P2-201ENST00000587677 504 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX56Q9NY93 ELOCP5-201ENST00000604924 333 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 AL356157.2-201ENST00000605122 111 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 AL731566.2-201ENST00000618971 317 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 AC005858.4-201ENST00000623191 700 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX56Q9NY93 MIR7153-201ENST00000637758 57 ntBASIC3.56□□□□□ -1.84
DDX56Q9NY93 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
DDX56Q9NY93 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.56□□□□□ -1.84
DDX56Q9NY93 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
DDX56Q9NY93 MTND4P12-201ENST00000498999 1377 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 RNU6-933P-201ENST00000384424 107 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 MIR627-201ENST00000384979 97 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
DDX56Q9NY93 RN7SKP32-201ENST00000410167 303 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 CYCSP19-201ENST00000411715 316 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 RPL31P12-201ENST00000422587 358 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 BX276092.3-201ENST00000424182 230 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 AL445584.1-201ENST00000431451 330 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX56Q9NY93 RPL32P28-201ENST00000443577 397 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX56Q9NY93 RNU6-329P-201ENST00000459618 107 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 MTCO1P29-201ENST00000496868 288 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 RNU6-875P-201ENST00000516488 106 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 SCARNA3-201ENST00000517097 143 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX56Q9NY93 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX56Q9NY93 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX56Q9NY93 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX56Q9NY93 AC009314.1-201ENST00000603871 304 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 AC245389.1-201ENST00000605141 529 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 AC009994.1-201ENST00000606889 253 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 AC005046.1-201ENST00000608515 625 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 AC064836.2-201ENST00000609491 462 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 AL121772.2-201ENST00000614331 297 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 AC097372.5-201ENST00000623665 376 ntBASIC3.55□□□□□ -1.84
DDX56Q9NY93 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
DDX56Q9NY93 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
DDX56Q9NY93 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
DDX56Q9NY93 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX56Q9NY93 RNU6-1222P-201ENST00000384615 107 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX56Q9NY93 RNU6ATAC-201ENST00000408749 126 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX56Q9NY93 AL353705.1-201ENST00000433468 480 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX56Q9NY93 AC007969.2-201ENST00000441891 191 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX56Q9NY93 PPP1R2P5-201ENST00000457256 603 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 HMGN1P18-201ENST00000457642 277 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 AC008526.1-201ENST00000509149 338 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 AC104619.4-201ENST00000510773 249 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX56Q9NY93 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX56Q9NY93 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX56Q9NY93 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX56Q9NY93 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX56Q9NY93 AC073410.2-201ENST00000603240 332 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 SRGNP1-201ENST00000603392 451 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 AL160281.1-201ENST00000605307 311 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
DDX56Q9NY93 AL356274.2-201ENST00000624379 3752 ntBASIC3.54□□□□□ -1.84
DDX56Q9NY93 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.53□□□□□ -1.84
DDX56Q9NY93 Y_RNA.135-201ENST00000363439 95 ntBASIC3.53□□□□□ -1.84
DDX56Q9NY93 SNORD116-11-201ENST00000383882 92 ntBASIC3.53□□□□□ -1.84
DDX56Q9NY93 SNORA5A-201ENST00000384111 134 ntBASIC3.53□□□□□ -1.84
DDX56Q9NY93 MIR544A-201ENST00000384855 91 ntBASIC3.53□□□□□ -1.84
DDX56Q9NY93 MIR1193-201ENST00000408109 78 ntBASIC3.53□□□□□ -1.84
DDX56Q9NY93 RNU2-23P-201ENST00000410545 195 ntBASIC3.53□□□□□ -1.84
DDX56Q9NY93 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 305.5 ms