Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AL356280.1-201ENST00000603614 379 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AL136363.2-201ENST00000604173 851 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AC243829.7-201ENST00000633081 225 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 OR5AK4P-201ENST00000635912 903 ntBASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.09□□□□□ -1.91
SMC4Q9NTJ3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 SNORD3E-201ENST00000362899 217 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 U3.37-201ENST00000408528 213 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 C8orf59P1-201ENST00000429930 303 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AL596276.1-201ENST00000434465 418 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AL445687.1-201ENST00000439946 251 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AL162395.1-201ENST00000457882 422 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AC006512.1-201ENST00000468816 291 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 RPL9P6-201ENST00000492764 598 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AC010493.1-201ENST00000513479 292 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 RNA5SP503-201ENST00000517047 117 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 BTF3P12-201ENST00000519620 469 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AC109329.2-201ENST00000519658 482 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AP002770.2-201ENST00000543613 532 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AC092325.1-201ENST00000566449 554 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AC116312.1-201ENST00000606841 314 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 RNU6-91P-201ENST00000607774 107 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AC068792.1-201ENST00000621354 417 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AC005609.4-201ENST00000625071 447 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 MIR1291-201ENST00000627649 87 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AC080128.1-201ENST00000474389 1917 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AL109809.4-201ENST00000603520 2185 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 AL359854.1-201ENST00000614203 1594 ntBASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SMC4Q9NTJ3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 MIR449A-201ENST00000362113 91 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 MIR21-201ENST00000362134 72 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 Y_RNA.3-201ENST00000362331 103 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 RNU6-1120P-201ENST00000362988 108 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 RNU6-1042P-201ENST00000384204 107 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 RNU6-550P-201ENST00000391057 101 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 RNU4-46P-201ENST00000410818 138 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 UBE2V1P10-201ENST00000414685 269 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 MTATP6P18-201ENST00000417994 673 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AC004383.1-201ENST00000438135 289 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 RPS29P15-201ENST00000458329 171 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 HMGB1P29-201ENST00000505659 499 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AC234781.5-201ENST00000508429 271 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AC026436.1-201ENST00000510537 270 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 MIR3117-201ENST00000584034 78 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AC103810.6-201ENST00000606708 136 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AC067747.1-201ENST00000608026 250 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AF250324.2-201ENST00000608299 610 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AL158209.2-201ENST00000619266 216 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 AC138627.2-201ENST00000624202 601 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 ZNF680P1-201ENST00000436625 1469 ntBASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
SMC4Q9NTJ3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 MIR6073-201ENST00000352083 89 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 Y_RNA.1-201ENST00000352915 104 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 RNA5SP126-201ENST00000365092 109 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 CALM2P3-201ENST00000400429 449 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AL591416.1-201ENST00000404015 867 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 RNU4-55P-201ENST00000410731 137 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AL353621.1-201ENST00000418219 243 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC073464.1-201ENST00000429823 534 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC002486.1-201ENST00000435098 391 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AL356010.1-201ENST00000456364 102 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC073901.1-201ENST00000462471 408 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 341.5 ms