Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 OR5H15-201ENST00000383696 930 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 RNU5A-6P-201ENST00000384136 116 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 Y_RNA.559-201ENST00000384686 107 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AL663109.1-201ENST00000411498 844 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 MTCO2P19-201ENST00000427513 598 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC002486.1-201ENST00000435098 391 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 CALM1P1-201ENST00000442082 433 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AP001486.1-201ENST00000463339 476 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AL049873.1-201ENST00000480540 376 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 MRPL42P6-201ENST00000486397 371 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 MTCO3P9-201ENST00000506989 781 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC108078.1-201ENST00000508073 725 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 MTCO3P7-201ENST00000510008 774 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC114781.4-201ENST00000513707 639 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC087241.2-201ENST00000535801 324 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC078814.3-201ENST00000553036 491 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 MTCYBP33-201ENST00000575007 1130 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 MIR4765-201ENST00000585007 77 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AC008945.2-201ENST00000606056 604 ntBASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.14□□□□□ -2.07
EXOSC3Q9NQT5 AL136360.1-201ENST00000503377 1900 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 OR4G2P-201ENST00000328113 903 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 Y_RNA.1-201ENST00000352915 104 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-1120P-201ENST00000362988 108 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 RNU4-75P-201ENST00000364621 146 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-1303P-201ENST00000364841 107 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-1042P-201ENST00000384204 107 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-72P-201ENST00000384285 79 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-45P-201ENST00000384471 107 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-606P-201ENST00000384721 111 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 RNU2-66P-201ENST00000410650 161 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AL353193.1-201ENST00000421444 268 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 MTCYBP8-201ENST00000422855 651 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 WARS2P1-201ENST00000429678 537 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AL513328.1-201ENST00000446460 224 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 NDUFB1P2-201ENST00000449477 176 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC090096.1-201ENST00000489168 390 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC023141.11-201ENST00000508864 202 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC105313.1-201ENST00000509121 353 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC091133.4-201ENST00000511142 308 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 Y_RNA.687-201ENST00000516558 91 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 IGLV3-17-201ENST00000519099 244 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 MTATP6P3-201ENST00000581686 676 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AL356280.1-201ENST00000603614 379 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 AL109809.4-201ENST00000603520 2185 ntBASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
EXOSC3Q9NQT5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 Y_RNA.510-201ENST00000384511 114 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-748P-201ENST00000384648 107 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 RNU6-220P-201ENST00000390919 107 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 RPS4XP7-201ENST00000406274 780 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 RNU4-55P-201ENST00000410731 137 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 AL353621.1-201ENST00000418219 243 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 USP9YP27-201ENST00000418455 438 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 AL669831.1-202ENST00000428504 417 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 RPL30P4-201ENST00000429309 333 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 DLGAP5P1-201ENST00000430307 464 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 GTF2IP13-201ENST00000438487 386 ntBASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.12□□□□□ -2.07
EXOSC3Q9NQT5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms