Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC002064.3-201ENST00000623448 346 ntBASIC3.18□□□□□ -1.9
NECTIN3Q9NQS3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.18□□□□□ -1.9
NECTIN3Q9NQS3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NECTIN3Q9NQS3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
NECTIN3Q9NQS3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 SAR1AP2-201ENST00000392696 594 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC022028.1-201ENST00000412054 408 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 PDCL2P1-201ENST00000419302 352 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 UBE2V1P4-201ENST00000425374 344 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AL591043.1-201ENST00000432461 424 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 RPS15AP10-201ENST00000432472 382 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC093019.1-201ENST00000443135 252 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 RPL32P28-201ENST00000443577 397 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 MRPL50P4-201ENST00000446432 475 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC008526.1-201ENST00000509149 338 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC096745.1-201ENST00000509945 370 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC074250.1-201ENST00000511117 192 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 MRPS36P2-201ENST00000512569 299 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 RNU6-1088P-201ENST00000516850 104 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC011611.1-201ENST00000552179 197 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC103996.1-201ENST00000555468 102 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC074050.1-201ENST00000563247 211 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 MIR4790-201ENST00000577799 79 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC064836.2-201ENST00000609491 462 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 U4.7-201ENST00000638126 106 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.17□□□□□ -1.9
NECTIN3Q9NQS3 MIR208A-201ENST00000362287 71 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 RNU6-428P-201ENST00000362942 107 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 Y_RNA.142-201ENST00000363491 102 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 Y_RNA.301-201ENST00000364990 103 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 SNORD116-11-201ENST00000383882 92 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AL358075.3-201ENST00000426289 226 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 SNAP23P1-201ENST00000433229 246 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AC124916.1-201ENST00000444020 547 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AC146507.2-201ENST00000460608 476 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 RPL39P5-202ENST00000512505 151 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 RNU6-566P-201ENST00000516790 107 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 RNA5SP454-201ENST00000517231 127 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AC005476.1-201ENST00000554427 397 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 MIR3944-201ENST00000581277 108 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AC100830.2-201ENST00000581636 240 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AC008739.2-201ENST00000597006 317 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 SRGNP1-201ENST00000603392 451 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AL670379.10-201ENST00000604330 253 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AL670379.9-201ENST00000605428 253 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AC009994.1-201ENST00000606889 253 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AC097372.5-201ENST00000623665 376 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 SNORA50A-202ENST00000629536 136 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 AL133216.2-202ENST00000634512 349 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 TPTEP1-208ENST00000636884 213 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 MIR3529-201ENST00000637713 78 ntBASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.16□□□□□ -1.9
NECTIN3Q9NQS3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.15□□□□□ -1.9
NECTIN3Q9NQS3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 SNORD56.1-201ENST00000362913 68 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 RNA5SP72-201ENST00000364442 117 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 RNA5SP267-201ENST00000364893 126 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 MIR34B-201ENST00000385076 84 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 RNA5SP44-201ENST00000410446 133 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AL590632.1-201ENST00000424289 371 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 HMGB1P18-201ENST00000438801 619 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AC009296.1-201ENST00000443146 155 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 RNU6-1037P-201ENST00000459571 107 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AC130509.1-201ENST00000464158 433 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 COPS8P3-201ENST00000526024 482 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 MIR4276-201ENST00000584832 70 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AC091135.1-201ENST00000585943 307 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AL162713.1-201ENST00000604480 262 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AC104237.2-201ENST00000612456 443 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 AC244517.12-201ENST00000623581 663 ntBASIC3.15□□□□□ -1.91
NECTIN3Q9NQS3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms