Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNA5SP219-201ENST00000390940 113 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 SNORA26.7-201ENST00000391288 122 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 RNU6-1025P-201ENST00000410629 104 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 RNU2-68P-201ENST00000410878 191 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AC063976.3-201ENST00000426849 329 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 MYL8P-204ENST00000431574 518 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 RPL21P2-201ENST00000440049 481 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 PRPS1P1-201ENST00000445305 876 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AL109933.2-201ENST00000452651 260 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 RPS3P1-201ENST00000456781 192 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AC091179.1-201ENST00000461606 579 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AC007547.1-201ENST00000462177 490 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AC008628.2-201ENST00000502605 298 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 FAM206BP-201ENST00000510179 541 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AC112206.3-201ENST00000514578 389 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 RNU6-189P-201ENST00000516120 101 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 PSMA3P-201ENST00000555485 635 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AMZ2P1-203ENST00000565833 850 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 MIR5692A1-201ENST00000580523 69 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AC060766.3-201ENST00000591442 263 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 VN1R80P-201ENST00000597126 338 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AC021646.1-201ENST00000605469 484 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 FTX_3.1-201ENST00000610451 147 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 AL359198.2-201ENST00000611836 194 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 DUSP12P1-201ENST00000612874 516 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.67□□□□□ -1.98
SIX2Q9NPC8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SIX2Q9NPC8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 CBX3P1-201ENST00000325243 554 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 Y_RNA.373-201ENST00000365600 103 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 RNU6-767P-201ENST00000384132 107 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 RNU6-1035P-201ENST00000384477 107 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 SNORA1.3-201ENST00000384676 136 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 RPS4XP7-201ENST00000406274 780 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 NUP35P1-201ENST00000422734 947 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 MTCO3P46-201ENST00000425787 232 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 USP9YP8-201ENST00000441913 500 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AL590664.1-201ENST00000448065 339 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 RPL12P25-201ENST00000455592 494 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 RNU7-66P-201ENST00000459469 62 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AC008571.1-201ENST00000467232 300 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AC083904.1-201ENST00000487828 231 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AC139453.3-201ENST00000493276 369 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AC091951.2-201ENST00000500762 203 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AC008716.1-201ENST00000511084 513 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 RN7SKP24-201ENST00000515888 284 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 RNU6-507P-201ENST00000516045 100 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 BTF3P12-201ENST00000519620 469 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AC107953.1-201ENST00000522216 297 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 HMGB1P14-201ENST00000557424 591 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 UBE2V2P2-201ENST00000587677 504 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AC007938.3-201ENST00000604965 623 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 MIR7106-201ENST00000612419 65 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 MIR6076-201ENST00000617521 113 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 AC009248.2-201ENST00000619826 254 ntBASIC2.66□□□□□ -1.98
SIX2Q9NPC8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SIX2Q9NPC8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.65□□□□□ -1.98
SIX2Q9NPC8 MIR21-201ENST00000362134 72 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 Y_RNA.70-201ENST00000362886 110 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 RNU6-270P-201ENST00000364131 105 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 SNORA32.2-201ENST00000384049 122 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 Y_RNA.530-201ENST00000384587 101 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 AL353621.1-201ENST00000418219 243 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.65□□□□□ -1.99
SIX2Q9NPC8 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.65□□□□□ -1.99
SIX2Q9NPC8 RPL23AP83-201ENST00000434984 473 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 SNRPEP4-201ENST00000435815 279 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 SSXP4-201ENST00000451349 245 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 MTND3P25-201ENST00000509243 135 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 RNU6-875P-201ENST00000516488 106 ntBASIC2.65□□□□□ -1.99
SIX2Q9NPC8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.65□□□□□ -1.99
SIX2Q9NPC8 AC025755.1-201ENST00000521306 278 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms