Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 ARL5AP1-201ENST00000418991 388 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 FABP5P14-201ENST00000437273 393 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 GSTA11P-201ENST00000452866 669 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC083904.1-201ENST00000487828 231 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC079140.5-201ENST00000507882 310 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 RNU6-1069P-201ENST00000516612 133 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 RPL7P20-201ENST00000520308 745 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC007458.1-201ENST00000542812 373 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AP000907.4-201ENST00000604143 237 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC107304.1-201ENST00000604229 296 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 RNU6-85P-201ENST00000605989 107 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC104458.1-201ENST00000608243 463 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AL121757.2-201ENST00000611223 313 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 MIR3529-201ENST00000637713 78 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 AC080128.1-201ENST00000474389 1917 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
CHMP1AQ9HD42 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 U3.12-201ENST00000364498 214 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 RNU6-877P-201ENST00000383868 107 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 MRPS10P2-201ENST00000431226 381 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 MICF-203ENST00000432679 129 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 FGF7P6-202ENST00000451282 293 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 AL441985.1-201ENST00000457727 251 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 RNA5SP76-201ENST00000516277 87 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 RN7SKP272-201ENST00000516988 232 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 AC069113.1-201ENST00000517763 267 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 COX6CP5-201ENST00000527162 228 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 MIR4765-201ENST00000585007 77 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 MIR5692C1-201ENST00000585309 91 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 AC021646.1-201ENST00000605469 484 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 RNU6-91P-201ENST00000607774 107 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 AC039056.2-201ENST00000622261 511 ntBASIC2.59□□□□□ -1.99
CHMP1AQ9HD42 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CHMP1AQ9HD42 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.59□□□□□ -2
CHMP1AQ9HD42 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.59□□□□□ -2
CHMP1AQ9HD42 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.59□□□□□ -2
CHMP1AQ9HD42 AC121333.1-201ENST00000567488 2709 ntBASIC2.59□□□□□ -2
CHMP1AQ9HD42 AC010329.5-201ENST00000623497 2174 ntBASIC2.59□□□□□ -2
CHMP1AQ9HD42 AL359854.1-201ENST00000614203 1594 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 RNU6-428P-201ENST00000362942 107 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 RNU1-33P-201ENST00000364249 162 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 RNU6-622P-201ENST00000384272 103 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 MIR490-201ENST00000384865 128 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 PTMAP2-201ENST00000397627 327 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 AL139095.1-201ENST00000404326 391 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.58□□□□□ -2
CHMP1AQ9HD42 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 AC006026.2-201ENST00000457376 180 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 RN7SL863P-201ENST00000462370 296 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 RN7SL20P-201ENST00000488827 297 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 MTCYBP18-201ENST00000501056 747 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 SNORA25.11-201ENST00000515935 105 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.58□□□□□ -2
CHMP1AQ9HD42 CTHRC1P1-201ENST00000605383 469 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.58□□□□□ -2
CHMP1AQ9HD42 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CHMP1AQ9HD42 U6atac.1-201ENST00000616025 117 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 AC002553.4-201ENST00000616896 331 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 AC012442.3-202ENST00000636742 206 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 MIR3662-201ENST00000637030 95 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 MTCO1P12-201ENST00000414273 1543 ntBASIC2.58□□□□□ -2
CHMP1AQ9HD42 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CHMP1AQ9HD42 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CHMP1AQ9HD42 HAUS6P2-201ENST00000433254 2404 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHMP1AQ9HD42 SNORD56.1-201ENST00000362913 68 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 RNU6-1180P-201ENST00000364935 107 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 RNU6-487P-201ENST00000365430 104 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 Y_RNA.373-201ENST00000365600 103 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 MIR181B1-201ENST00000385240 110 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 SNORD67-201ENST00000390833 111 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 RNU4-26P-201ENST00000410270 107 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 AL117339.3-201ENST00000418733 162 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AL365400.1-201ENST00000431854 640 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC006028.1-201ENST00000438379 402 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC013470.1-201ENST00000453438 462 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 RNU7-138P-201ENST00000459479 64 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms