Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.42□□□□□ -1.86
VPS16Q9H269 AL158156.1-201ENST00000422509 473 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS16Q9H269 AL159987.2-201ENST00000432754 307 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 RPS27P27-201ENST00000498779 255 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 SUMO2P6-201ENST00000505273 288 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 MTCYBP40-201ENST00000509390 1135 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 AC104136.1-201ENST00000512969 394 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 SMURF2P1-201ENST00000514992 481 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 RNU6-189P-201ENST00000516120 101 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS16Q9H269 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.42□□□□□ -1.86
VPS16Q9H269 MIR5692A1-201ENST00000580523 69 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 AC007938.3-201ENST00000604965 623 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 AC098657.3-201ENST00000620434 263 ntBASIC3.42□□□□□ -1.86
VPS16Q9H269 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS16Q9H269 MTND4P1-201ENST00000457501 1466 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VPS16Q9H269 ZNF519P1-201ENST00000449011 1626 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS16Q9H269 MTND5P1-201ENST00000445440 1375 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 MTND5P19-201ENST00000424872 1794 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS16Q9H269 Y_RNA.112-201ENST00000363250 102 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 RNU6-395P-201ENST00000365662 106 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 SNORD116-11-201ENST00000383882 92 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 RNA5SP219-201ENST00000390940 113 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 SNORA48.7-201ENST00000391302 135 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 AL139039.1-201ENST00000401900 692 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 AL357075.1-201ENST00000404107 726 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS16Q9H269 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 Y_RNA.605-201ENST00000410577 105 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 BX682237.1-201ENST00000415016 335 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS16Q9H269 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS16Q9H269 AC097713.2-201ENST00000430199 356 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS16Q9H269 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS16Q9H269 MTND5P22-201ENST00000458380 195 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 Y_RNA.653-201ENST00000459091 95 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 DYNLL1P5-201ENST00000467158 270 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 RPL21P129-201ENST00000491732 478 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS16Q9H269 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.41□□□□□ -1.86
VPS16Q9H269 RPL39P5-202ENST00000512505 151 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 RNU6-928P-201ENST00000516876 104 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 RNU6-1213P-201ENST00000517075 94 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS16Q9H269 AC090115.3-201ENST00000553218 849 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 AL157871.3-201ENST00000557231 293 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 AC138761.3-201ENST00000579993 334 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 AC100830.2-201ENST00000581636 240 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 CYP2C61P-201ENST00000604072 290 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 AL138726.1-201ENST00000614873 333 ntBASIC3.41□□□□□ -1.86
VPS16Q9H269 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
VPS16Q9H269 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.4□□□□□ -1.86
VPS16Q9H269 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS16Q9H269 Y_RNA.33-201ENST00000362591 102 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 Y_RNA.148-201ENST00000363557 117 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS16Q9H269 DYNLT3P1-201ENST00000378574 347 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 Y_RNA.482-201ENST00000384377 111 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 SNORA16.2-201ENST00000390991 127 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 RNU6-1077P-201ENST00000410506 102 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS16Q9H269 RPL12P25-201ENST00000455592 494 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 RPL30P15-201ENST00000457129 321 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 RPL21P41-201ENST00000459863 264 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 HMGN2P13-201ENST00000476476 274 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 AC006483.1-201ENST00000487308 313 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 RN7SL20P-201ENST00000488827 297 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS16Q9H269 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS16Q9H269 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS16Q9H269 AC106782.4-201ENST00000568264 210 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 MIR548AC-201ENST00000585049 88 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS16Q9H269 ATP1B3P1-201ENST00000605365 821 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 7SK.10-201ENST00000621414 298 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 U6.105-201ENST00000637379 88 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 HSPA8P4-201ENST00000511877 1920 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS16Q9H269 MTND5P10-201ENST00000603719 1809 ntBASIC3.4□□□□□ -1.87
VPS16Q9H269 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
VPS16Q9H269 Y_RNA.5-201ENST00000362334 102 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 RNU6-1309P-201ENST00000363305 108 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 RNU6-371P-201ENST00000364283 108 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 RNU6-601P-201ENST00000384540 107 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 RNU6-310P-201ENST00000384655 107 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 MIR183-201ENST00000384958 110 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 MIR568-201ENST00000385036 95 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VPS16Q9H269 AL360182.1-201ENST00000397433 468 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 MIR888-201ENST00000401186 77 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 RNA5SP38-201ENST00000410750 119 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 Y_RNA.646-201ENST00000410980 101 ntBASIC3.39□□□□□ -1.87
VPS16Q9H269 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS16Q9H269 AL139396.1-201ENST00000421137 167 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms