Protein–RNA interactions for Protein: Q9H1J1

UPF3A, Regulator of nonsense transcripts 3A, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AQ9H1J1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 OR9R1P-201ENST00000412200 877 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 MTND4LP11-201ENST00000422184 280 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 CALM2P2-201ENST00000428512 440 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 HMGN2P3-201ENST00000433603 273 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 HMGN2P5-201ENST00000436882 273 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 MTND4P18-201ENST00000447010 465 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 RPS20P20-201ENST00000460498 340 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 RPL31P60-201ENST00000478450 367 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 AL163973.1-201ENST00000484753 577 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 RNU6-1256P-201ENST00000516539 103 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 AC026464.5-201ENST00000562497 722 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 DEFB122-202ENST00000569013 197 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 MIR4703-201ENST00000577728 79 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 MIR5583-1-201ENST00000580941 59 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 AC130324.3-201ENST00000614165 542 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 DUXAP9-208ENST00000622815 614 ntBASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
UPF3AQ9H1J1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
UPF3AQ9H1J1 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.65□□□□□ -1.98
UPF3AQ9H1J1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
UPF3AQ9H1J1 AC099654.7-201ENST00000635788 2127 ntBASIC2.65□□□□□ -1.98
UPF3AQ9H1J1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AL513331.1-201ENST00000411908 397 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AL096701.2-201ENST00000416920 238 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AL109913.1-201ENST00000421173 514 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 SEPT14P3-201ENST00000439401 183 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AL732372.2-207ENST00000445840 183 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AL590664.1-201ENST00000448065 339 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 SEPT14P2-201ENST00000453405 183 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 RNU7-182P-201ENST00000459009 62 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 RPL23AP49-201ENST00000492925 468 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 SEPT14P4-201ENST00000513445 186 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AC105417.1-201ENST00000514691 285 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 RNU6-123P-201ENST00000516163 102 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 RNU6-927P-201ENST00000516199 100 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 RNU6-358P-201ENST00000516564 75 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 RNU6-685P-201ENST00000517088 95 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 FO082796.1-201ENST00000523795 183 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 HIF1AP1-201ENST00000553642 175 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AC015712.3-201ENST00000559380 164 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 MIR3921-201ENST00000577308 85 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 MIR4424-201ENST00000585257 86 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AC060766.3-201ENST00000591442 263 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AL356575.1-201ENST00000603008 283 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AL355073.2-201ENST00000612106 557 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AC012409.4-201ENST00000612923 249 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 FRG1KP-201ENST00000623592 341 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 MIR3662-201ENST00000637030 95 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 MTND5P42-201ENST00000637720 498 ntBASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
UPF3AQ9H1J1 AC103710.2-202ENST00000641454 2853 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 RNU6-288P-201ENST00000363690 104 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 MIR493-201ENST00000385254 89 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 FGF7P8-201ENST00000402994 292 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 HMGN2P30-201ENST00000423237 256 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 RPL7L1P10-201ENST00000427790 463 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 RPL36AP53-201ENST00000432891 316 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 AL591806.2-201ENST00000433122 173 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 MTCO2P3-201ENST00000442543 421 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 IFNA11P-201ENST00000446352 526 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 RNU7-180P-201ENST00000459240 63 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 EIF4EP3-201ENST00000498782 656 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 MTCYBP18-201ENST00000501056 747 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 CCDC34P1-201ENST00000507441 517 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 AC074344.1-201ENST00000512823 224 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 Y_RNA.689-201ENST00000516589 107 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 SNRPGP18-201ENST00000553000 214 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 MIR5007-201ENST00000583098 95 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 AC060780.3-201ENST00000589464 80 ntBASIC2.64□□□□□ -1.99
UPF3AQ9H1J1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms