Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 Y_RNA.414-201ENST00000384011 101 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AL139095.1-201ENST00000404326 391 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AC138393.2-201ENST00000414742 246 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 RPL31P12-201ENST00000422587 358 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AC125238.1-201ENST00000448842 249 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AL109933.2-201ENST00000452651 260 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AC010401.1-201ENST00000463867 348 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 RPS4XP22-201ENST00000480755 780 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 SNORA20.3-201ENST00000516880 132 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AC087241.2-201ENST00000535801 324 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AC138761.3-201ENST00000579993 334 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AL357078.3-201ENST00000607528 618 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 MAPK10-362ENST00000641864 4484 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 AL136360.1-201ENST00000503377 1900 ntBASIC3.68□□□□□ -1.82
RTFDC1Q9BY42 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 RNU6-1303P-201ENST00000364841 107 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 RNU6-1280P-201ENST00000365211 107 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 SNORA18.3-201ENST00000384122 132 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 MIR184-201ENST00000384962 84 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AL096701.2-201ENST00000416920 238 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 BX679664.1-201ENST00000434429 253 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AC098614.3-201ENST00000438957 440 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 MTND4LP16-201ENST00000440828 295 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AC083904.1-201ENST00000487828 231 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AC006199.1-201ENST00000548728 219 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AC008121.1-201ENST00000603244 268 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 Z69720.2-201ENST00000624755 279 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AC073476.4-201ENST00000628409 72 ntBASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RTFDC1Q9BY42 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 RNU4-82P-201ENST00000362443 140 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 Y_RNA.279-201ENST00000364763 95 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 RNU6-898P-201ENST00000365627 104 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 Z98749.2-208ENST00000381646 500 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 RNU6-214P-201ENST00000384130 107 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 RNU6-767P-201ENST00000384132 107 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 MIR518D-201ENST00000385014 87 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 AL445529.1-201ENST00000398713 389 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 PGBD4P6-201ENST00000421501 610 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 AL353572.1-201ENST00000442490 417 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 RNU1-143P-201ENST00000516296 146 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 RNU6-323P-201ENST00000521915 107 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 AL121821.2-201ENST00000556081 394 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 AC007151.1-201ENST00000572774 483 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 OR1M4P-201ENST00000589199 287 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 U1.23-201ENST00000610293 146 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 RNU1-68P-201ENST00000615382 146 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 AL136221.1-201ENST00000621449 509 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 U1.39-201ENST00000621562 146 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 AC099654.7-201ENST00000635788 2127 ntBASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTFDC1Q9BY42 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RTFDC1Q9BY42 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RTFDC1Q9BY42 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.65□□□□□ -1.82
RTFDC1Q9BY42 CBX3P1-201ENST00000325243 554 ntBASIC3.65□□□□□ -1.83
RTFDC1Q9BY42 Y_RNA.167-201ENST00000363735 109 ntBASIC3.65□□□□□ -1.83
RTFDC1Q9BY42 RNU5E-7P-201ENST00000365290 117 ntBASIC3.65□□□□□ -1.83
RTFDC1Q9BY42 RNU6-750P-201ENST00000390946 107 ntBASIC3.65□□□□□ -1.83
RTFDC1Q9BY42 NCOR1P3-201ENST00000420479 303 ntBASIC3.65□□□□□ -1.83
RTFDC1Q9BY42 MTCO3P46-201ENST00000425787 232 ntBASIC3.65□□□□□ -1.83
RTFDC1Q9BY42 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.65□□□□□ -1.83
RTFDC1Q9BY42 AL161651.1-201ENST00000440882 223 ntBASIC3.65□□□□□ -1.83
RTFDC1Q9BY42 RPS12P18-201ENST00000442381 270 ntBASIC3.65□□□□□ -1.83
RTFDC1Q9BY42 AC124916.1-201ENST00000444020 547 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms