Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 AC107401.1-201ENST00000503426 685 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 MRPS36P2-201ENST00000512569 299 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 RNU6-390P-201ENST00000516259 103 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 AP006587.4-201ENST00000526053 529 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 AC024619.4-201ENST00000580924 316 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 SNORD14A-201ENST00000606526 91 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 AP002826.1-201ENST00000608835 315 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 AL359740.1-201ENST00000624340 592 ntBASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.88□□□□□ -2.11
RSPO3Q9BXY4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 RNU5A-1-201ENST00000362698 116 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 RNU6-1284P-201ENST00000363701 100 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 Y_RNA.381-201ENST00000365666 102 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 RNU6-1042P-201ENST00000384204 107 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 RNU6-1197P-201ENST00000391183 107 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 MIR1289-2-201ENST00000408360 111 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 RNU2-8P-201ENST00000410727 190 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 MTND1P34-201ENST00000438556 671 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AL714022.1-201ENST00000439897 151 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 RNU6-548P-201ENST00000517083 115 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 HMGN1P28-201ENST00000521340 364 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AP003072.2-201ENST00000527756 676 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC005832.2-201ENST00000538921 1430 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC124947.2-202ENST00000552735 133 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 TPRKBP2-201ENST00000565969 475 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC025449.1-201ENST00000603896 529 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC013553.2-201ENST00000604244 589 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC007363.1-201ENST00000604736 620 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 Z84480.1-201ENST00000605131 311 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC025754.2-201ENST00000606491 432 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AP002360.4-201ENST00000606980 481 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 SDR42E1P2-201ENST00000614861 481 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 AL158209.2-201ENST00000619266 216 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 MIR6863-201ENST00000636112 90 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 OR5H6-203ENST00000642105 978 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 ZNF355P-201ENST00000427301 3216 ntBASIC1.87□□□□□ -2.11
RSPO3Q9BXY4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 Y_RNA.296-201ENST00000364930 108 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 Y_RNA.372-201ENST00000365599 102 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 RNU4-52P-201ENST00000384209 138 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 MIR558-201ENST00000384920 94 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AL079342.1-201ENST00000401460 267 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 NDUFS5P1-201ENST00000405668 289 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 SNORD23.1-201ENST00000408212 104 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 MIR548F1-201ENST00000408667 84 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 RN7SKP32-201ENST00000410167 303 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AL356379.1-201ENST00000414105 126 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AL451054.2-201ENST00000420896 202 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 USP12PX-201ENST00000432383 1057 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 MTND1P4-201ENST00000435196 415 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 MTND1P1-201ENST00000445453 368 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC020550.1-201ENST00000447385 163 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AL136380.1-201ENST00000447970 162 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC007182.2-201ENST00000489251 402 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 SNORA31.3-201ENST00000516029 96 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 RNU2-10P-201ENST00000516375 211 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 RNU6-506P-201ENST00000516553 94 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 OR5B19P-201ENST00000531766 928 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AK6P1-201ENST00000540219 478 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC093012.1-202ENST00000549403 582 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 MIR4448-201ENST00000584360 86 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC005498.1-201ENST00000592125 465 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC007684.1-201ENST00000609671 477 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AL031601.2-202ENST00000622650 282 ntBASIC1.86□□□□□ -2.11
RSPO3Q9BXY4 AC093648.1-201ENST00000623546 606 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms