Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MTND1P12-201ENST00000455231 147 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 PPP1R2P5-201ENST00000457256 603 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 RPL22P13-201ENST00000493291 347 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC005840.1-201ENST00000498412 377 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC109927.2-201ENST00000506416 303 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 Y_RNA.689-201ENST00000516589 107 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 ACA59.2-201ENST00000517061 156 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 SNORA31.19-201ENST00000517079 126 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 RNU6-1315P-201ENST00000517187 99 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC012213.3-201ENST00000577199 777 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 MIR4419B-201ENST00000577260 68 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 MIR1273C-201ENST00000578669 77 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC234772.3-201ENST00000602277 528 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC104010.1-201ENST00000616889 150 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 AC024581.2-201ENST00000619986 252 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPAP1Q9BWH6 SNORA40C-201ENST00000391285 128 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 MTCYBP36-201ENST00000404146 440 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC092809.3-201ENST00000415453 231 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AL593851.1-201ENST00000426171 157 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AL008629.1-201ENST00000438615 184 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC092473.1-201ENST00000441098 221 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AL590365.1-201ENST00000450788 243 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 RPL36AP48-201ENST00000485521 314 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC023194.1-201ENST00000493084 308 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 TRMT112P2-201ENST00000512910 132 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC117532.1-201ENST00000514638 323 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 SNORA3.4-201ENST00000515969 96 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 RN7SKP265-201ENST00000516448 223 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 Z75746.1-201ENST00000440243 2080 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 RNU5F-6P-201ENST00000362979 116 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 MIR518D-201ENST00000385014 87 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 RNU6-1025P-201ENST00000410629 104 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC097463.2-201ENST00000421074 142 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 TAF9P1-201ENST00000445421 515 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 TAF9P2-201ENST00000454958 515 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 BTF3P15-201ENST00000455606 336 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 RPS3AP22-201ENST00000488297 769 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 SNORA25.11-201ENST00000515935 105 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 MIR892C-201ENST00000516410 77 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC002400.1-201ENST00000569310 726 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 MIR15A-201ENST00000607334 83 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 RNU6-87P-201ENST00000607561 108 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 AC027807.2-201ENST00000616099 408 ntBASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.1□□□□□ -2.07
RPAP1Q9BWH6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RPAP1Q9BWH6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RPAP1Q9BWH6 Y_RNA.355-201ENST00000365462 98 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 RNU6-166P-201ENST00000384371 107 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 Y_RNA.608-201ENST00000410647 95 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AL356379.1-201ENST00000414105 126 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AC011233.1-201ENST00000422812 283 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AL078601.1-201ENST00000444542 271 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 KLF3P2-201ENST00000465138 268 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AC011005.2-201ENST00000487324 359 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 MRPS33P3-201ENST00000513456 322 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 RNU7-51P-201ENST00000516560 62 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 RNA5SP337-201ENST00000517007 109 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AP003181.2-201ENST00000528941 181 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AP003122.4-201ENST00000530980 758 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AL133241.1-201ENST00000556832 487 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AL157871.3-201ENST00000557231 293 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AC012435.1-202ENST00000568772 240 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 MIR5697-201ENST00000578045 78 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 SNORD14A-201ENST00000606526 91 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AL031775.1-201ENST00000607014 887 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 MIR8081-201ENST00000611533 95 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 AC091932.3-201ENST00000624223 323 ntBASIC2.09□□□□□ -2.08
RPAP1Q9BWH6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
RPAP1Q9BWH6 SNORD56.2-201ENST00000363242 71 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms