Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 LINC02471-203ENST00000641941 4752 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.188-201ENST00000363952 111 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.238-201ENST00000364441 102 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 RNU6-890P-201ENST00000384121 107 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 RNU6-1222P-201ENST00000384615 107 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 MIR34A-201ENST00000385130 110 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 MIR450B-201ENST00000401182 78 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 RNA5SP247-201ENST00000411181 105 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 AL627311.1-201ENST00000431514 115 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 AL078601.1-201ENST00000444542 271 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 AL136097.1-201ENST00000456945 913 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 AC128713.1-201ENST00000471495 306 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 AC009901.1-201ENST00000506703 541 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 RNU6-264P-201ENST00000517134 104 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 MIR4782-201ENST00000577987 79 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 AL139395.1-201ENST00000603662 160 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 FAM157A-202ENST00000615155 405 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 MIR7111-201ENST00000619751 72 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 MIR7702-201ENST00000621931 59 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 PLCE1P1-201ENST00000622094 305 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 MIR4727-201ENST00000622232 55 ntBASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.67□□□□□ -1.82
LRFN3Q9BTN0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 RNU4-82P-201ENST00000362443 140 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.176-201ENST00000363815 109 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.252-201ENST00000364556 101 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 RNU6-593P-201ENST00000364716 112 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.364-201ENST00000365532 101 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 SNORA75B-201ENST00000384053 137 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.463-201ENST00000384271 102 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 MIR93-201ENST00000385024 80 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 SNORA40C-201ENST00000391285 128 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 AL391417.1-201ENST00000404100 426 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 Y_RNA.623-201ENST00000411128 95 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 AC003685.2-201ENST00000422795 395 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 AC007560.1-201ENST00000426912 237 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 MYL8P-204ENST00000431574 518 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 Z98949.2-201ENST00000440996 144 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 TRBV12-1-201ENST00000479785 344 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 RNU6-1016P-201ENST00000516689 94 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 RNU6-572P-201ENST00000516724 80 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 RNU6-1271P-201ENST00000517049 105 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 SNORA31.19-201ENST00000517079 126 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 HSPE1P7-201ENST00000604681 321 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 SNORA62.6-201ENST00000606322 83 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 AC010378.1-201ENST00000619270 362 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 AC092608.2-201ENST00000624427 218 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 U6.99-201ENST00000637524 83 ntBASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LRFN3Q9BTN0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LRFN3Q9BTN0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
LRFN3Q9BTN0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
LRFN3Q9BTN0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 RHOT1P2-201ENST00000366423 333 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 RNU6-26P-201ENST00000383985 107 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 RNY1P14-201ENST00000384426 108 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AC096644.2-201ENST00000429278 159 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 SNAP23P1-201ENST00000433229 246 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 MTND3P25-201ENST00000509243 135 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.661-201ENST00000516003 99 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 RNU6-928P-201ENST00000516876 104 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 RNU6-703P-201ENST00000516946 107 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AC087854.1-201ENST00000519706 414 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AC100770.1-201ENST00000532310 322 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 MIR4474-201ENST00000579189 78 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 BNIP3P16-201ENST00000589779 534 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AC110741.2-201ENST00000605278 268 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms