Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL355816.2-201ENST00000610049 647 ntBASIC1.22□□□□□ -2.21
UPK3BQ9BT76 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.22□□□□□ -2.21
UPK3BQ9BT76 uc_338.12-201ENST00000616344 181 ntBASIC1.22□□□□□ -2.21
UPK3BQ9BT76 AC108479.2-201ENST00000617314 601 ntBASIC1.22□□□□□ -2.21
UPK3BQ9BT76 AC090517.3-201ENST00000625170 141 ntBASIC1.22□□□□□ -2.21
UPK3BQ9BT76 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
UPK3BQ9BT76 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
UPK3BQ9BT76 Y_RNA.46-201ENST00000362695 102 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 RNU6-960P-201ENST00000364056 120 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 RNU6-546P-201ENST00000383991 107 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 RNU6-190P-201ENST00000384154 102 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 RNU11-3P-201ENST00000391111 133 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 RNU2-32P-201ENST00000411193 191 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK3BQ9BT76 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK3BQ9BT76 RNA5SP57-201ENST00000459463 123 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC087884.1-201ENST00000469738 328 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 RPL23AP63-201ENST00000498752 471 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC096745.1-201ENST00000509945 370 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 RNU6-970P-201ENST00000516312 107 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 SNORA25.15-201ENST00000516487 89 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 Y_RNA.689-201ENST00000516589 107 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC135279.1-201ENST00000543493 504 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 CR383656.8-201ENST00000549046 145 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK3BQ9BT76 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.21□□□□□ -2.22
UPK3BQ9BT76 MIR3618-201ENST00000580330 88 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 MIR4307-201ENST00000582802 84 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC009977.1-201ENST00000586015 570 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 BNIP3P30-201ENST00000601184 574 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC112187.2-201ENST00000604345 283 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 MIR502-201ENST00000606349 86 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC021755.4-201ENST00000616620 456 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AL353997.5-201ENST00000618886 171 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 AC024940.5-201ENST00000622889 474 ntBASIC1.21□□□□□ -2.22
UPK3BQ9BT76 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 RNU6-511P-201ENST00000363496 107 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 RNA5SP363-201ENST00000365072 115 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 RNU6-487P-201ENST00000365430 104 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 RNU6-946P-201ENST00000383878 107 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 RNU6-611P-201ENST00000384276 104 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 RNA5SP465-201ENST00000391195 109 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AL355143.1-201ENST00000407101 841 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 Y_RNA.623-201ENST00000411128 95 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 VN1R36P-201ENST00000414936 291 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AL365338.1-201ENST00000422282 858 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AL022400.1-201ENST00000423946 935 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC003989.2-201ENST00000440224 169 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AL606517.1-201ENST00000446914 387 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AL583843.1-201ENST00000456070 346 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 FCF1P6-201ENST00000456841 595 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 USP9YP25-201ENST00000457708 443 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 snoU109.2-201ENST00000459316 135 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 HMGB1P30-201ENST00000492455 606 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 RPS29P11-201ENST00000496507 171 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC011979.2-201ENST00000527568 352 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 GNAI2P1-201ENST00000541815 315 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC123904.2-201ENST00000548059 300 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 MIR4509-3-201ENST00000578671 94 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 MIR4713-201ENST00000582691 75 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 MIR4509-2-201ENST00000583920 94 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AL670379.2-201ENST00000604983 252 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AL670379.4-201ENST00000605279 254 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC121334.2-201ENST00000605387 271 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC144521.1-201ENST00000607148 956 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AL157392.4-201ENST00000609756 345 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 MIR4509-1-201ENST00000618224 94 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC006338.1-201ENST00000618453 749 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 U1.36-201ENST00000620684 176 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 AC103706.2-201ENST00000638080 240 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.2□□□□□ -2.22
UPK3BQ9BT76 HAUS6P2-201ENST00000433254 2404 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 MTND4P16-201ENST00000466108 1367 ntBASIC1.2□□□□□ -2.22
UPK3BQ9BT76 RNA5SP432-201ENST00000362480 116 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 RNU6-655P-201ENST00000362858 107 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 RNU6-529P-201ENST00000363383 104 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
UPK3BQ9BT76 SNORA67.5-201ENST00000391036 107 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AL627390.1-201ENST00000396055 340 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AL033519.2-201ENST00000403958 392 ntBASIC1.19□□□□□ -2.22
UPK3BQ9BT76 AC092809.3-201ENST00000415453 231 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms