Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC005336.3-201ENST00000623833 2679 ntBASIC1.83□□□□□ -2.12
FOXC2Q99958 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.83□□□□□ -2.12
FOXC2Q99958 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
FOXC2Q99958 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.82□□□□□ -2.12
FOXC2Q99958 RNU1-72P-201ENST00000362976 153 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 RNU6-960P-201ENST00000364056 120 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 RNU4-91P-201ENST00000364778 135 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 RNU1-51P-201ENST00000365345 176 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 Y_RNA.534-201ENST00000384599 112 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 MIR518D-201ENST00000385014 87 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 SNORA26.8-201ENST00000391306 124 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 RNU2-36P-201ENST00000410361 191 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 RNA5SP270-201ENST00000411361 118 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.82□□□□□ -2.12
FOXC2Q99958 AL589872.1-201ENST00000426602 288 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXC2Q99958 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.82□□□□□ -2.12
FOXC2Q99958 AL353706.1-201ENST00000436728 494 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 RPL22P17-201ENST00000438729 315 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.82□□□□□ -2.12
FOXC2Q99958 USP9YP12-201ENST00000450481 570 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 SNRPGP9-201ENST00000456025 225 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 CYP2C59P-201ENST00000457790 269 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 BET1P1-201ENST00000482276 359 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 MTND1P3-201ENST00000484956 952 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 AC011005.2-201ENST00000487324 359 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 SNORA31.25-201ENST00000517242 134 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXC2Q99958 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.82□□□□□ -2.12
FOXC2Q99958 MIR548AB-201ENST00000584917 84 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 AC174048.1-201ENST00000603389 144 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 Z94722.1-201ENST00000604328 474 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 AL359999.1-201ENST00000604513 294 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 AC121247.2-201ENST00000604776 136 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 AL355297.2-201ENST00000604792 129 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.82□□□□□ -2.12
FOXC2Q99958 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 AC010378.1-201ENST00000619270 362 ntBASIC1.82□□□□□ -2.12
FOXC2Q99958 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
FOXC2Q99958 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
FOXC2Q99958 MIR378A-201ENST00000362177 66 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 MIRLET7G-201ENST00000362280 84 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 RNY1P10-201ENST00000363268 113 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 RNA5SP240-201ENST00000365355 128 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 SNORA4.3-201ENST00000365564 137 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 RNU6-898P-201ENST00000365627 104 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 SMIM11P1-201ENST00000369586 178 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 SNORA48.3-201ENST00000391081 134 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
FOXC2Q99958 Y_RNA.598-201ENST00000410480 95 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.81□□□□□ -2.12
FOXC2Q99958 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.81□□□□□ -2.12
FOXC2Q99958 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.81□□□□□ -2.12
FOXC2Q99958 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.81□□□□□ -2.12
FOXC2Q99958 AL031667.1-201ENST00000440222 725 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 USP9YP15-201ENST00000442391 422 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 MTND6P13-201ENST00000443510 523 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.81□□□□□ -2.12
FOXC2Q99958 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.81□□□□□ -2.12
FOXC2Q99958 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.81□□□□□ -2.12
FOXC2Q99958 RNA5SP269-201ENST00000459032 137 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 MTCO2P29-201ENST00000465212 189 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.81□□□□□ -2.12
FOXC2Q99958 AC055731.1-201ENST00000474387 401 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.81□□□□□ -2.12
FOXC2Q99958 SNORA25.11-201ENST00000515935 105 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 RNA5SP337-201ENST00000517007 109 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 RNU2-46P-201ENST00000517038 113 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.81□□□□□ -2.12
FOXC2Q99958 RPL21P5-201ENST00000554662 472 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.81□□□□□ -2.12
FOXC2Q99958 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.81□□□□□ -2.12
FOXC2Q99958 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.81□□□□□ -2.12
FOXC2Q99958 AP001981.2-201ENST00000603241 418 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 AC121334.2-201ENST00000605387 271 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 AP001486.3-201ENST00000615334 372 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 AC009831.4-201ENST00000620744 325 ntBASIC1.81□□□□□ -2.12
FOXC2Q99958 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.81□□□□□ -2.12
FOXC2Q99958 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
FOXC2Q99958 AC138393.1-203ENST00000327086 343 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 U8.3-201ENST00000363321 132 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
FOXC2Q99958 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.8□□□□□ -2.12
FOXC2Q99958 Y_RNA.466-201ENST00000384294 113 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 RNU6-297P-201ENST00000384636 107 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 MIR95-201ENST00000385072 81 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 SNORA40C-201ENST00000391285 128 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 RNU6-248P-201ENST00000410720 107 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 RNU6-321P-201ENST00000410912 106 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AC009518.2-201ENST00000418056 731 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.8□□□□□ -2.12
FOXC2Q99958 MTATP6P17-201ENST00000431030 672 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AC009961.2-201ENST00000435771 251 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AL161788.1-201ENST00000441805 169 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AC245517.4-201ENST00000448601 281 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.8□□□□□ -2.12
FOXC2Q99958 BTF3P15-201ENST00000455606 336 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AC112771.1-201ENST00000463581 102 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 RPS27P21-201ENST00000486977 252 ntBASIC1.8□□□□□ -2.12
FOXC2Q99958 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms