Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNA5SP181-201ENST00000410246 98 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 AC097463.2-201ENST00000421074 142 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX3Q99909 AL135938.1-201ENST00000443141 297 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 RPL7P12-201ENST00000446719 750 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 AL118520.1-201ENST00000450770 291 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX3Q99909 AL356010.1-201ENST00000456364 102 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 RNU7-63P-201ENST00000459054 62 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 AC112771.1-201ENST00000463581 102 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 AC090515.1-201ENST00000465295 476 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 AC091133.4-201ENST00000511142 308 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 AC074344.1-201ENST00000512823 224 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 Y_RNA.687-201ENST00000516558 91 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX3Q99909 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX3Q99909 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX3Q99909 AL391646.1-201ENST00000603860 190 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 NDUFA8P1-201ENST00000605525 367 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 Z99129.1-201ENST00000612510 255 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 CR381653.2-201ENST00000624041 768 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 AC138627.2-201ENST00000624202 601 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 AC005609.4-201ENST00000625071 447 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SSX3Q99909 AC096644.4-201ENST00000563417 2912 ntBASIC2.32□□□□□ -2.04
SSX3Q99909 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.32□□□□□ -2.04
SSX3Q99909 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SSX3Q99909 AC068050.1-201ENST00000394891 380 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 RPS4XP8-201ENST00000402039 771 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AL591416.1-201ENST00000404015 867 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 RNU2-29P-201ENST00000410423 189 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 RNU4-55P-201ENST00000410731 137 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.31□□□□□ -2.04
SSX3Q99909 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.31□□□□□ -2.04
SSX3Q99909 MTCO2P19-201ENST00000427513 598 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.31□□□□□ -2.04
SSX3Q99909 AC087499.2-201ENST00000432861 149 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 CALM1P1-201ENST00000442082 433 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.31□□□□□ -2.04
SSX3Q99909 AC011753.1-201ENST00000451001 220 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AL122001.1-201ENST00000457027 370 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 GMFBP1-201ENST00000467831 427 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.31□□□□□ -2.04
SSX3Q99909 HIGD1AP13-201ENST00000509878 289 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AF213884.2-201ENST00000510417 903 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 MTND3P5-201ENST00000512798 333 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.31□□□□□ -2.04
SSX3Q99909 RNU5B-3P-201ENST00000516601 115 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 RNA5SP402-201ENST00000517148 110 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.31□□□□□ -2.04
SSX3Q99909 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.31□□□□□ -2.04
SSX3Q99909 AC008752.3-201ENST00000588113 712 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AL138963.2-201ENST00000605137 226 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AL033523.1-201ENST00000605153 153 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 RNU6-91P-201ENST00000607774 107 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 RMST_4.1-201ENST00000616886 107 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AC026585.1-201ENST00000619582 524 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AC024581.2-201ENST00000619986 252 ntBASIC2.31□□□□□ -2.04
SSX3Q99909 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.31□□□□□ -2.04
SSX3Q99909 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.3□□□□□ -2.04
SSX3Q99909 RNU6-942P-201ENST00000363002 107 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 RNU1-91P-201ENST00000364746 163 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSX3Q99909 OR5H15-201ENST00000383696 930 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 SNORA18.3-201ENST00000384122 132 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 Y_RNA.559-201ENST00000384686 107 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 RAP1BP3-201ENST00000407180 549 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 RNU2-66P-201ENST00000410650 161 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 RNU6-607P-201ENST00000411283 108 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.3□□□□□ -2.04
SSX3Q99909 USP9YP14-201ENST00000430663 563 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 AC105272.1-201ENST00000438604 198 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 AC006026.2-201ENST00000457376 180 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 MED28P2-201ENST00000475771 317 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 AC140059.1-201ENST00000489238 361 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 LRRC34P2-201ENST00000514850 553 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 IGLV3-17-201ENST00000519099 244 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 GTF3AP2-201ENST00000557014 266 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 RPS3AP23-202ENST00000574601 686 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.3□□□□□ -2.04
SSX3Q99909 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.3□□□□□ -2.04
SSX3Q99909 RPS15AP11-201ENST00000594193 385 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 AC012507.3-201ENST00000603556 477 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 AC104073.3-201ENST00000610942 955 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 AC012640.5-201ENST00000623897 319 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 MIR3529-201ENST00000637713 78 ntBASIC2.3□□□□□ -2.04
SSX3Q99909 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SSX3Q99909 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
SSX3Q99909 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SSX3Q99909 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SSX3Q99909 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SSX3Q99909 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
SSX3Q99909 MTND5P26-201ENST00000426018 1752 ntBASIC2.29□□□□□ -2.04
SSX3Q99909 MTND4P14-201ENST00000435799 1354 ntBASIC2.29□□□□□ -2.04
SSX3Q99909 OR4G2P-201ENST00000328113 903 ntBASIC2.29□□□□□ -2.04
SSX3Q99909 RNU6-259P-201ENST00000383999 107 ntBASIC2.29□□□□□ -2.04
SSX3Q99909 RNU6-517P-201ENST00000384362 110 ntBASIC2.29□□□□□ -2.04
SSX3Q99909 SNORA80E-201ENST00000384744 137 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms