Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.93□□□□□ -2.1
SCN2AQ99250 Y_RNA.1-201ENST00000352915 104 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 RNU4-24P-201ENST00000364565 139 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 RNU6-1083P-201ENST00000384022 107 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 USP9YP6-201ENST00000413550 854 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN2AQ99250 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN2AQ99250 RPL31P35-201ENST00000431058 377 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AL591212.2-201ENST00000433923 257 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AC104850.1-201ENST00000435940 476 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AL714022.1-201ENST00000439897 151 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 RPL23AP58-201ENST00000440453 469 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AC244505.5-201ENST00000443639 207 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN2AQ99250 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN2AQ99250 AC091965.2-201ENST00000512324 613 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 RNU6-703P-201ENST00000516946 107 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.93□□□□□ -2.1
SCN2AQ99250 AC060788.1-201ENST00000521318 469 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AC135279.1-201ENST00000543493 504 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN2AQ99250 AC068790.2-201ENST00000602601 557 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AL355877.2-201ENST00000603670 358 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AL138889.2-201ENST00000603883 242 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 Z84480.1-201ENST00000605131 311 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 SCARNA4-202ENST00000625402 129 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 Z99571.1-201ENST00000636677 394 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SCN2AQ99250 AC002543.1-201ENST00000299783 1954 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 RNU6-858P-201ENST00000362436 107 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 Y_RNA.140-201ENST00000363474 103 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 RNU6-1322P-201ENST00000364309 107 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 RNU4-66P-201ENST00000365199 138 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN2AQ99250 FTH1P15-201ENST00000406984 280 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 Y_RNA.595-201ENST00000410403 105 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
SCN2AQ99250 AC114491.1-201ENST00000416095 246 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AL160275.3-201ENST00000423876 471 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 PTGES3P4-201ENST00000426243 356 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN2AQ99250 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN2AQ99250 BTF3P15-201ENST00000455606 336 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.93□□□□□ -2.1
SCN2AQ99250 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN2AQ99250 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN2AQ99250 AGGF1P4-201ENST00000568249 801 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN2AQ99250 SEPT14P19-203ENST00000633205 211 ntBASIC1.93□□□□□ -2.1
SCN2AQ99250 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SCN2AQ99250 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN2AQ99250 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN2AQ99250 Y_RNA.41-201ENST00000362646 102 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 SNORD116-20-201ENST00000384529 92 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 Y_RNA.576-201ENST00000384781 102 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U8.13-201ENST00000390842 128 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 RNU2-2P-201ENST00000410396 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 RNU2-68P-201ENST00000410878 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 Y_RNA.623-201ENST00000411128 95 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 RNA5SP247-201ENST00000411181 105 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 AL512844.2-201ENST00000433990 593 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 MTND4P32-201ENST00000437189 1237 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 AC003989.2-201ENST00000440224 169 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 AL022238.1-201ENST00000442557 355 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN2AQ99250 UBBP3-201ENST00000445497 241 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.92□□□□□ -2.1
SCN2AQ99250 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN2AQ99250 RNU6-953P-201ENST00000459154 107 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 RPS15AP34-201ENST00000487776 387 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.92□□□□□ -2.1
SCN2AQ99250 SNORD27.1-201ENST00000516319 72 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.92□□□□□ -2.1
SCN2AQ99250 OR5B19P-201ENST00000531766 928 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 AC087883.1-201ENST00000551882 391 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 MTCYBP33-201ENST00000575007 1130 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.15-201ENST00000611544 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 AC013562.2-201ENST00000611632 603 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.16-201ENST00000613119 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.12-201ENST00000613778 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.20-201ENST00000613956 192 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.9-201ENST00000615427 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.11-201ENST00000616345 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.2-201ENST00000616535 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.3-201ENST00000617785 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.19-201ENST00000618602 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 RNU2-1-201ENST00000618664 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.6-201ENST00000619225 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.5-201ENST00000619465 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 U2.10-201ENST00000620268 191 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
SCN2AQ99250 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.92□□□□□ -2.1
SCN2AQ99250 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCN2AQ99250 CKAP2P1-201ENST00000555477 2049 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.91□□□□□ -2.1
SCN2AQ99250 MIRLET7G-201ENST00000362280 84 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 Y_RNA.255-201ENST00000364581 97 ntBASIC1.91□□□□□ -2.1
SCN2AQ99250 RNU6-116P-201ENST00000384042 109 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms