Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MTAPP1-201ENST00000489154 819 ntBASIC2.14□□□□□ -2.07
VPS35Q96QK1 HMGB1P30-201ENST00000492455 606 ntBASIC2.14□□□□□ -2.07
VPS35Q96QK1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS35Q96QK1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS35Q96QK1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS35Q96QK1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS35Q96QK1 AC136619.2-201ENST00000563361 631 ntBASIC2.14□□□□□ -2.07
VPS35Q96QK1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS35Q96QK1 MIR3682-201ENST00000581338 84 ntBASIC2.14□□□□□ -2.07
VPS35Q96QK1 APOOP1-201ENST00000604695 592 ntBASIC2.14□□□□□ -2.07
VPS35Q96QK1 AL355297.2-201ENST00000604792 129 ntBASIC2.14□□□□□ -2.07
VPS35Q96QK1 AC093788.1-201ENST00000609356 927 ntBASIC2.14□□□□□ -2.07
VPS35Q96QK1 MIR3529-201ENST00000637713 78 ntBASIC2.14□□□□□ -2.07
VPS35Q96QK1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.14□□□□□ -2.07
VPS35Q96QK1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS35Q96QK1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS35Q96QK1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS35Q96QK1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS35Q96QK1 RNA5SP240-201ENST00000365355 128 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 SNORA11.4-201ENST00000408823 129 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 RNU6-195P-201ENST00000411352 109 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS35Q96QK1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS35Q96QK1 MTATP6P16-201ENST00000434543 526 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS35Q96QK1 AL445567.1-201ENST00000439121 144 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS35Q96QK1 CALM1P1-201ENST00000442082 433 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 RPL32P28-201ENST00000443577 397 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AL360271.2-201ENST00000447710 161 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AL118520.1-201ENST00000450770 291 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS35Q96QK1 CYP2C59P-201ENST00000457790 269 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC116562.3-201ENST00000506136 177 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC068587.5-201ENST00000528506 175 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 RANP3-201ENST00000530970 276 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS35Q96QK1 PSMA3P-201ENST00000555485 635 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 RPS3AP23-202ENST00000574601 686 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS35Q96QK1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS35Q96QK1 AL713866.2-201ENST00000603579 219 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC138649.3-201ENST00000622154 254 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AL031601.2-202ENST00000622650 282 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AL359740.1-201ENST00000624340 592 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AP003400.5-201ENST00000624827 617 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS35Q96QK1 AC110994.2-201ENST00000635481 492 ntBASIC2.13□□□□□ -2.07
VPS35Q96QK1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
VPS35Q96QK1 SNORD114-19-201ENST00000363072 75 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 Y_RNA.169-201ENST00000363745 96 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 RNU6-843P-201ENST00000384454 104 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 SNORA40.3-201ENST00000390964 122 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 RNU6-387P-201ENST00000411331 105 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC138623.1-201ENST00000418060 216 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS35Q96QK1 AL022238.1-201ENST00000442557 355 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC012308.1-201ENST00000451232 178 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS35Q96QK1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS35Q96QK1 snoU109.1-201ENST00000459339 135 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC104435.1-201ENST00000483483 166 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 RPL9P6-201ENST00000492764 598 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 ANXA2P1-201ENST00000505539 926 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS35Q96QK1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 RNU6-685P-201ENST00000517088 95 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC090572.1-201ENST00000519251 160 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC060788.1-201ENST00000521318 469 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC087883.1-201ENST00000551882 391 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC145350.1-201ENST00000567426 208 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AL670379.4-201ENST00000605279 254 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC021646.1-201ENST00000605469 484 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC063944.3-201ENST00000609969 533 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC013412.1-201ENST00000610687 192 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 AC093648.1-201ENST00000623546 606 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 SCARNA4-202ENST00000625402 129 ntBASIC2.12□□□□□ -2.07
VPS35Q96QK1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS35Q96QK1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS35Q96QK1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS35Q96QK1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS35Q96QK1 RNU6-384P-201ENST00000364900 104 ntBASIC2.11□□□□□ -2.07
VPS35Q96QK1 SNORA70B-201ENST00000384210 135 ntBASIC2.11□□□□□ -2.07
VPS35Q96QK1 SNORA26.8-201ENST00000391306 124 ntBASIC2.11□□□□□ -2.07
VPS35Q96QK1 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS35Q96QK1 UBE2V1P10-201ENST00000414685 269 ntBASIC2.11□□□□□ -2.07
VPS35Q96QK1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS35Q96QK1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS35Q96QK1 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS35Q96QK1 ISCA1P6-201ENST00000427740 390 ntBASIC2.11□□□□□ -2.07
VPS35Q96QK1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS35Q96QK1 AC009961.2-201ENST00000435771 251 ntBASIC2.11□□□□□ -2.07
VPS35Q96QK1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS35Q96QK1 AC016691.1-201ENST00000441321 413 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms