Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.4□□□□□ -2.03
VMP1Q96GC9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.4□□□□□ -2.03
VMP1Q96GC9 RNU4-29P-201ENST00000515943 174 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 RNU6-410P-201ENST00000517006 107 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VMP1Q96GC9 AC243972.3-201ENST00000539655 198 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 AL670379.2-201ENST00000604983 252 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 AC026790.2-201ENST00000606282 430 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 MIR6817-201ENST00000615588 66 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 AC091304.6-201ENST00000619761 202 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 AC007792.1-201ENST00000623023 402 ntBASIC2.4□□□□□ -2.03
VMP1Q96GC9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VMP1Q96GC9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
VMP1Q96GC9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VMP1Q96GC9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
VMP1Q96GC9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.39□□□□□ -2.03
VMP1Q96GC9 RNA5SP68-201ENST00000363885 119 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 USP9YP27-201ENST00000418455 438 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 USP9YP20-201ENST00000419224 558 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.39□□□□□ -2.03
VMP1Q96GC9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.39□□□□□ -2.03
VMP1Q96GC9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.39□□□□□ -2.03
VMP1Q96GC9 AC079781.2-201ENST00000446424 169 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.39□□□□□ -2.03
VMP1Q96GC9 AC137800.2-201ENST00000574375 120 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 AC007336.1-201ENST00000576365 3828 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 MIR5092-201ENST00000583139 88 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 AC087683.2-201ENST00000611384 326 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 AP001506.1-201ENST00000615444 211 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 AL603755.1-201ENST00000619504 163 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 RMST_7.1-201ENST00000621935 268 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 KPNA2P1-201ENST00000458289 1591 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 AC008555.8-201ENST00000623602 2168 ntBASIC2.39□□□□□ -2.03
VMP1Q96GC9 FARSBP1-201ENST00000435808 1778 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VMP1Q96GC9 SNORD56.1-201ENST00000362913 68 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 RNU6-1210P-201ENST00000363775 107 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 RNU6-116P-201ENST00000384042 109 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 SNORA40.19-201ENST00000390846 128 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 RNU6-195P-201ENST00000411352 109 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 OR6C66P-201ENST00000414917 930 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.38□□□□□ -2.03
VMP1Q96GC9 AC000111.3-201ENST00000433478 193 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 AC009961.2-201ENST00000435771 251 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.38□□□□□ -2.03
VMP1Q96GC9 GAPDHP17-201ENST00000449858 1001 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 ART2BP-201ENST00000453501 499 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 AL121594.1-201ENST00000475906 575 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.38□□□□□ -2.03
VMP1Q96GC9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.38□□□□□ -2.03
VMP1Q96GC9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.38□□□□□ -2.03
VMP1Q96GC9 OR5AL2P-201ENST00000532185 920 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 AC109446.2-201ENST00000567872 497 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 SNRPGP17-201ENST00000603780 214 ntBASIC2.38□□□□□ -2.03
VMP1Q96GC9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.38□□□□□ -2.03
VMP1Q96GC9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
VMP1Q96GC9 RNU6-212P-201ENST00000362642 104 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 MIR27B-201ENST00000385129 97 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 CBX3P9-201ENST00000402326 552 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 OR9R1P-201ENST00000412200 877 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 AC005005.2-201ENST00000420779 380 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 GPR143P-201ENST00000434155 205 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 AL137159.1-201ENST00000452808 512 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.37□□□□□ -2.03
VMP1Q96GC9 MTND3P25-201ENST00000509243 135 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.37□□□□□ -2.03
VMP1Q96GC9 RNA5SP148-201ENST00000516527 94 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 RNU6-667P-201ENST00000517186 102 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
VMP1Q96GC9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.37□□□□□ -2.03
VMP1Q96GC9 AC087241.2-201ENST00000535801 324 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.37□□□□□ -2.03
VMP1Q96GC9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VMP1Q96GC9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.37□□□□□ -2.03
VMP1Q96GC9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.37□□□□□ -2.03
VMP1Q96GC9 RMST_4.1-201ENST00000616886 107 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 U4.3-201ENST00000621047 82 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 AC091932.3-201ENST00000624223 323 ntBASIC2.37□□□□□ -2.03
VMP1Q96GC9 AL359851.1-201ENST00000569460 4997 ntBASIC2.36□□□□□ -2.03
VMP1Q96GC9 U3.13-201ENST00000364804 214 ntBASIC2.36□□□□□ -2.03
VMP1Q96GC9 MT-TH-201ENST00000387441 69 ntBASIC2.36□□□□□ -2.03
VMP1Q96GC9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.36□□□□□ -2.03
VMP1Q96GC9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.36□□□□□ -2.03
VMP1Q96GC9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.36□□□□□ -2.03
VMP1Q96GC9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.36□□□□□ -2.03
VMP1Q96GC9 CACYBPP2-201ENST00000453625 678 ntBASIC2.36□□□□□ -2.03
VMP1Q96GC9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.36□□□□□ -2.03
VMP1Q96GC9 snoU13.14-201ENST00000459372 104 ntBASIC2.36□□□□□ -2.03
VMP1Q96GC9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.36□□□□□ -2.03
VMP1Q96GC9 HMGB1P35-201ENST00000503360 598 ntBASIC2.36□□□□□ -2.03
VMP1Q96GC9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.36□□□□□ -2.03
VMP1Q96GC9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.36□□□□□ -2.03
VMP1Q96GC9 AP002453.2-201ENST00000533503 320 ntBASIC2.36□□□□□ -2.03
VMP1Q96GC9 MIR4513-201ENST00000581077 86 ntBASIC2.36□□□□□ -2.03
VMP1Q96GC9 MIR98-201ENST00000606724 119 ntBASIC2.36□□□□□ -2.03
VMP1Q96GC9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
VMP1Q96GC9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms