Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VPS33AQ96AX1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
VPS33AQ96AX1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
VPS33AQ96AX1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 RNU6-1127P-201ENST00000384580 107 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 MIR95-201ENST00000385072 81 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 AL138827.1-201ENST00000402666 306 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 MTCO2P19-201ENST00000427513 598 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.53□□□□□ -2
VPS33AQ96AX1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.53□□□□□ -2
VPS33AQ96AX1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.53□□□□□ -2
VPS33AQ96AX1 MTATP6P26-201ENST00000445926 662 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 MTND1P29-201ENST00000448112 647 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.53□□□□□ -2
VPS33AQ96AX1 RNU7-63P-201ENST00000459054 62 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 AC133134.1-201ENST00000466800 359 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.53□□□□□ -2
VPS33AQ96AX1 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.53□□□□□ -2
VPS33AQ96AX1 CKS1BP7-201ENST00000522230 235 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.53□□□□□ -2
VPS33AQ96AX1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.53□□□□□ -2
VPS33AQ96AX1 AC079600.2-201ENST00000550076 130 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.53□□□□□ -2
VPS33AQ96AX1 MTCO3P23-201ENST00000561363 289 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.53□□□□□ -2
VPS33AQ96AX1 uc_338.15-201ENST00000615470 191 ntBASIC2.53□□□□□ -2
VPS33AQ96AX1 Z82209.1-201ENST00000422141 2135 ntBASIC2.53□□□□□ -2.01
VPS33AQ96AX1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.53□□□□□ -2.01
VPS33AQ96AX1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 Y_RNA.51-201ENST00000362725 102 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 RNU6-552P-201ENST00000362869 119 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 MIR186-201ENST00000384988 86 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 RNU2-23P-201ENST00000410545 195 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AC016691.1-201ENST00000441321 413 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 SNRPFP3-201ENST00000457792 225 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 RPS3AP14-201ENST00000483907 780 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AC140059.1-201ENST00000489238 361 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 CKS1BP2-201ENST00000497342 240 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 MTCO3P7-201ENST00000510008 774 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 RNU2-69P-201ENST00000516061 100 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 RNA5SP367-201ENST00000516557 118 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AL137161.1-201ENST00000532231 390 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AC008752.3-201ENST00000588113 712 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AL713866.2-201ENST00000603579 219 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 AC002543.1-201ENST00000299783 1954 ntBASIC2.52□□□□□ -2.01
VPS33AQ96AX1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS33AQ96AX1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VPS33AQ96AX1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
VPS33AQ96AX1 MTND4P14-201ENST00000435799 1354 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 Y_RNA.1-201ENST00000352915 104 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 RNU6-529P-201ENST00000363383 104 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 Y_RNA.399-201ENST00000383955 105 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 SNORD70.1-201ENST00000391007 85 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 RNU6-903P-201ENST00000391270 109 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AL663109.1-201ENST00000411498 844 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS33AQ96AX1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AL161788.1-201ENST00000441805 169 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 MTND2P22-201ENST00000444325 1033 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 PRPS1P1-201ENST00000445305 876 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AL139109.1-201ENST00000455491 297 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 snoU13.14-201ENST00000459372 104 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AC090515.1-201ENST00000465295 476 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 RNU6-405P-201ENST00000516637 110 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS33AQ96AX1 MIR5092-201ENST00000583139 88 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AC087683.1-201ENST00000591187 441 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 NDUFA8P1-201ENST00000605525 367 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AC007684.1-201ENST00000609671 477 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AC008121.3-201ENST00000618726 433 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 U4.7-201ENST00000638126 106 ntBASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VPS33AQ96AX1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
VPS33AQ96AX1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS33AQ96AX1 SNORA16.2-201ENST00000390991 127 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 SNORA48.7-201ENST00000391302 135 ntBASIC2.5□□□□□ -2.01
VPS33AQ96AX1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms