Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 SETP5-201ENST00000437270 562 ntBASIC4□□□□□ -1.77
RTF1Q92541 GPM6BP1-201ENST00000446387 144 ntBASIC4□□□□□ -1.77
RTF1Q92541 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4□□□□□ -1.77
RTF1Q92541 AC104472.2-201ENST00000469035 601 ntBASIC4□□□□□ -1.77
RTF1Q92541 RN7SL442P-201ENST00000473804 320 ntBASIC4□□□□□ -1.77
RTF1Q92541 AC096576.1-201ENST00000489014 359 ntBASIC4□□□□□ -1.77
RTF1Q92541 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4□□□□□ -1.77
RTF1Q92541 RNA5SP217-201ENST00000515959 91 ntBASIC4□□□□□ -1.77
RTF1Q92541 RNU6-1016P-201ENST00000516689 94 ntBASIC4□□□□□ -1.77
RTF1Q92541 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4□□□□□ -1.77
RTF1Q92541 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4□□□□□ -1.77
RTF1Q92541 LARP7P3-201ENST00000579888 337 ntBASIC4□□□□□ -1.77
RTF1Q92541 AL080274.1-201ENST00000605565 220 ntBASIC4□□□□□ -1.77
RTF1Q92541 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4□□□□□ -1.77
RTF1Q92541 RMST_4.1-201ENST00000616886 107 ntBASIC4□□□□□ -1.77
RTF1Q92541 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4□□□□□ -1.77
RTF1Q92541 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RTF1Q92541 AL359693.1-201ENST00000614959 2407 ntBASIC4□□□□□ -1.77
RTF1Q92541 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.99□□□□□ -1.77
RTF1Q92541 RNU6-600P-201ENST00000362524 99 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 Y_RNA.146-201ENST00000363549 102 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 Y_RNA.395-201ENST00000383945 109 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 RNU6-1179P-201ENST00000384667 107 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RTF1Q92541 CYCSP33-201ENST00000414485 327 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 RPL32P35-201ENST00000415214 394 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 AC245054.2-201ENST00000415639 319 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 AC009237.8-201ENST00000445492 379 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.99□□□□□ -1.77
RTF1Q92541 ELOCP24-201ENST00000456370 334 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 Y_RNA.653-201ENST00000459091 95 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 Y_RNA.631-201ENST00000459607 101 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 AC116337.1-201ENST00000509680 687 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 RNA5SP290-201ENST00000517133 127 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.99□□□□□ -1.77
RTF1Q92541 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.99□□□□□ -1.77
RTF1Q92541 AC025423.5-201ENST00000550230 219 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 EIF4BP1-201ENST00000554881 351 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.99□□□□□ -1.77
RTF1Q92541 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.99□□□□□ -1.77
RTF1Q92541 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.99□□□□□ -1.77
RTF1Q92541 AC006386.2-201ENST00000624491 75 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 AC012005.1-201ENST00000624575 75 ntBASIC3.99□□□□□ -1.77
RTF1Q92541 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RTF1Q92541 AL365361.1-201ENST00000566942 3481 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTF1Q92541 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RTF1Q92541 U3.26-201ENST00000391236 204 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 EI24P2-201ENST00000397776 1076 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 RNU2-71P-201ENST00000411395 189 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.98□□□□□ -1.77
RTF1Q92541 UBE2V1P4-201ENST00000425374 344 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 AL645568.3-201ENST00000433683 316 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 AC096745.1-201ENST00000509945 370 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.98□□□□□ -1.77
RTF1Q92541 AC104027.1-201ENST00000521887 300 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 TRAV37-201ENST00000553906 342 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 TRAV28-201ENST00000557548 323 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.98□□□□□ -1.77
RTF1Q92541 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.98□□□□□ -1.77
RTF1Q92541 AC006023.2-201ENST00000609916 167 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 AC133104.2-201ENST00000615272 193 ntBASIC3.98□□□□□ -1.77
RTF1Q92541 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.98□□□□□ -1.77
RTF1Q92541 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.98□□□□□ -1.77
RTF1Q92541 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
RTF1Q92541 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTF1Q92541 MIR369-201ENST00000362155 70 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 SNORD3E-201ENST00000362899 217 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 RNU6-474P-201ENST00000384243 107 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 RNU6-95P-201ENST00000384697 107 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 MIR559-201ENST00000385188 96 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 RNU6-1025P-201ENST00000410629 104 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 AL590632.1-201ENST00000424289 371 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 UBE2D3P2-201ENST00000424409 445 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.97□□□□□ -1.77
RTF1Q92541 AC007919.1-201ENST00000429380 217 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.97□□□□□ -1.77
RTF1Q92541 MTND4P19-201ENST00000446659 478 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 AP001486.1-201ENST00000463339 476 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 MTCYBP40-201ENST00000509390 1135 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 AC093303.1-201ENST00000514549 295 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 RNU1-143P-201ENST00000516296 146 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 SCARNA13-201ENST00000516672 275 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 RNA5SP468-201ENST00000516782 93 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 RNU1-54P-201ENST00000517181 120 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.97□□□□□ -1.77
RTF1Q92541 MIR3690-201ENST00000580266 75 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 MIR3171-201ENST00000584270 74 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 SNRPGP17-201ENST00000603780 214 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 AC106900.2-201ENST00000604994 317 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 U1.23-201ENST00000610293 146 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 RNU1-68P-201ENST00000615382 146 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 MIR6128-201ENST00000615528 109 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 U1.39-201ENST00000621562 146 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 AL137790.1-201ENST00000634283 177 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 MTND5P10-201ENST00000603719 1809 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 AC007785.2-201ENST00000598627 1916 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
RTF1Q92541 AC007256.1-201ENST00000392253 2765 ntBASIC3.97□□□□□ -1.77
RTF1Q92541 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms