Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 Y_RNA.231-201ENST00000364358 102 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 Z98749.2-208ENST00000381646 500 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 RNU1-73P-201ENST00000383971 164 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 RNU6-45P-201ENST00000384471 107 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 RNU6-658P-201ENST00000384606 106 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 Y_RNA.573-201ENST00000384763 105 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 MIR181A2-201ENST00000384863 110 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 SNORA40C-201ENST00000391285 128 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 MIR888-201ENST00000401186 77 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AL592114.1-201ENST00000403842 483 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 Y_RNA.615-201ENST00000410769 117 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 BMS1P22-201ENST00000414726 313 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 RPLP0P7-201ENST00000416050 667 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 SNRPEP10-201ENST00000420249 274 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 HMGN2P30-201ENST00000423237 256 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AL353729.1-201ENST00000425044 720 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AL365496.1-201ENST00000426885 215 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AC007560.1-201ENST00000426912 237 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AL121601.2-201ENST00000438019 707 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AL590639.1-201ENST00000456484 337 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 DYNLL1P5-201ENST00000467158 270 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 YWHAEP4-201ENST00000505390 198 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 RNU2-69P-201ENST00000516061 100 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 RNU1-41P-201ENST00000516161 162 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 RNU1-48P-201ENST00000516400 162 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 RNA5SP24-201ENST00000516478 95 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 SNORD60.2-201ENST00000516883 86 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 MTND4P7-201ENST00000523876 130 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AP001094.1-201ENST00000579805 193 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 MTND4P14-201ENST00000435799 1354 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 AC099654.7-201ENST00000635788 2127 ntBASIC2.06□□□□□ -2.08
LINC01006Q8NI28 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
LINC01006Q8NI28 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 Y_RNA.167-201ENST00000363735 109 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RNU6-522P-201ENST00000364497 107 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RNU6-384P-201ENST00000364900 104 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RNU6-166P-201ENST00000384371 107 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RNU6-393P-201ENST00000384475 107 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 BX682237.1-201ENST00000415016 335 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AL451074.5-201ENST00000415894 435 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC009963.1-201ENST00000417265 157 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC098614.2-201ENST00000426040 255 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RPL26P9-201ENST00000457466 433 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RPS29P12-201ENST00000460178 152 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 TRBV1-201ENST00000476502 284 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RPL38P4-201ENST00000502376 214 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 TBCAP3-201ENST00000512475 312 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 Y_RNA.665-201ENST00000516177 98 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 SNORA9.3-201ENST00000516383 129 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RNU6-703P-201ENST00000516946 107 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RNU6-1183P-201ENST00000517054 60 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC078814.3-201ENST00000553036 491 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 MIR4635-201ENST00000583759 79 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RBM11P1-201ENST00000604951 799 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 RNU6-89P-201ENST00000606519 100 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC005046.1-201ENST00000608515 625 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC092807.2-201ENST00000609367 243 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AL359757.2-201ENST00000624309 274 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 U6.99-201ENST00000637524 83 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC093536.2-201ENST00000565257 1406 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 AC004520.1-201ENST00000608362 1413 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC01006Q8NI28 MTND5P7-201ENST00000413558 1798 ntBASIC2.05□□□□□ -2.08
LINC01006Q8NI28 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms