Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NEDD1Q8NHV4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 RNVU1-3-201ENST00000364313 161 ntBASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 Y_RNA.420-201ENST00000384043 110 ntBASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 HSPE1P12-201ENST00000412576 301 ntBASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 AL390729.2-201ENST00000416137 156 ntBASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 CYCSP10-201ENST00000417973 294 ntBASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 RNU6-168P-201ENST00000516189 101 ntBASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 MIR5684-201ENST00000585074 65 ntBASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 MIR7702-201ENST00000621931 59 ntBASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NEDD1Q8NHV4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 RNA5SP361-201ENST00000362686 118 ntBASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 RNU6-626P-201ENST00000363354 107 ntBASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 SNORA22-201ENST00000383907 134 ntBASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 SNORD12B-201ENST00000410433 91 ntBASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 AC092447.6-201ENST00000414578 210 ntBASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 AL358472.1-201ENST00000431295 329 ntBASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 AC115990.1-201ENST00000526957 301 ntBASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 MIR6130-201ENST00000619419 109 ntBASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
NEDD1Q8NHV4 AC110491.1-201ENST00000562191 2010 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 SAGE4P-201ENST00000442271 3381 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 SNORA60-201ENST00000362396 134 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 Y_RNA.121-201ENST00000363309 113 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 Y_RNA.123-201ENST00000363338 102 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 RNU6-1144P-201ENST00000384247 104 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 SNORA37-201ENST00000384504 129 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 MIR1302-4-201ENST00000408701 150 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 RPS15AP7-201ENST00000439294 405 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 GEMIN8P3-201ENST00000445417 720 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 IFNWP4-201ENST00000453148 294 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 RPL23AP45-201ENST00000476406 468 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 RAC1P5-201ENST00000512182 576 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AC026402.1-201ENST00000513642 170 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 SNORA40.9-201ENST00000515895 93 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 RNU6-567P-201ENST00000516746 107 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 RNU7-143P-201ENST00000516781 65 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 HMGB1P14-201ENST00000557424 591 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AP000787.2-201ENST00000604432 568 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 MIR432-201ENST00000606207 94 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AC007390.2-201ENST00000606229 3803 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 MIR6864-201ENST00000617935 70 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AC090617.7-201ENST00000623952 126 ntBASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NEDD1Q8NHV4 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 RNA5SP197-201ENST00000363357 119 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 RNU6-961P-201ENST00000363893 105 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 RNA5SP513-201ENST00000364648 118 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 RNU6-275P-201ENST00000364910 107 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 RNU6-1175P-201ENST00000365200 107 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 RNU6-20P-201ENST00000384106 107 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 MIR135A2-201ENST00000384854 100 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 MIR513C-201ENST00000401352 84 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 LAP3P1-201ENST00000403648 294 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 RNU6-628P-201ENST00000410675 107 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 AL592148.1-201ENST00000413568 445 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 POLR2KP2-201ENST00000438155 177 ntBASIC4.79□□□□□ -1.64
NEDD1Q8NHV4 RNU7-197P-201ENST00000458836 62 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms