Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 VN1R10P-201ENST00000447106 875 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RPL23AP3-201ENST00000453844 468 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 FAM206BP-201ENST00000510179 541 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 Y_RNA.675-201ENST00000516389 149 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNA5SP384-201ENST00000516615 116 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 CYCSP23-201ENST00000519781 313 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNU6-481P-201ENST00000384194 107 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 MIR1265-201ENST00000408444 86 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL353718.1-201ENST00000451028 517 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 SNORD19.2-201ENST00000516978 73 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 OR5AL2P-201ENST00000532185 920 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL022345.1-201ENST00000607292 135 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNU6-72P-201ENST00000384285 79 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNU6-750P-201ENST00000390946 107 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL139421.1-201ENST00000423010 169 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 MTATP6P30-201ENST00000443540 664 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AP001025.1-201ENST00000486139 332 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC109927.2-201ENST00000506416 303 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AK3P2-201ENST00000507976 429 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC133485.1-201ENST00000567176 124 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC138907.6-201ENST00000568401 126 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC013244.2-201ENST00000603396 103 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 OR4H6P-202ENST00000603819 340 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL138713.1-201ENST00000624026 2130 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNU6-754P-201ENST00000391166 107 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC092047.1-201ENST00000424997 240 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 SEPT14P24-201ENST00000447236 180 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 ARL2BPP5-201ENST00000523141 481 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC008443.7-201ENST00000622195 246 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 OR4G2P-201ENST00000328113 903 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 MIR561-201ENST00000385216 97 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 NDUFS5P1-201ENST00000405668 289 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL592310.1-201ENST00000414330 671 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC019070.1-201ENST00000415008 1024 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL449283.1-202ENST00000418249 604 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNU6-362P-201ENST00000516736 90 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC021451.1-201ENST00000523498 1129 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AP003033.1-201ENST00000527244 415 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC003001.2-201ENST00000616294 831 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC253576.2-201ENST00000618815 580 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC024581.2-201ENST00000619986 252 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNA5SP125-201ENST00000364843 120 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNU6-17P-201ENST00000384245 107 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 RNU6-18P-201ENST00000384527 107 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 DEFB130D-201ENST00000426866 237 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 UBE2V1P8-201ENST00000437166 265 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC004383.1-201ENST00000438135 289 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 ACA59.2-201ENST00000517061 156 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC115990.1-201ENST00000526957 301 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC093012.1-202ENST00000549403 582 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 AC021739.1-201ENST00000559631 174 ntBASIC0.29□□□□□ -2.36
SYNE1Q8NF91 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.29□□□□□ -2.36
SYNE1Q8NF91 Y_RNA.488-201ENST00000384403 102 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RNU6-1122P-201ENST00000384449 107 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 MTCO1P3-201ENST00000429327 192 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RSU1P2-202ENST00000437884 485 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 HMGB1P36-201ENST00000487709 576 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 MTND2P33-201ENST00000506452 1031 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 RN7SKP179-201ENST00000516126 217 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 OR6C7P-201ENST00000547875 934 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AC026271.5-201ENST00000577873 130 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AL713866.2-201ENST00000603579 219 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 AL583856.2-201ENST00000606298 543 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
SYNE1Q8NF91 MIR126-201ENST00000362291 85 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 Y_RNA.170-201ENST00000363746 110 ntBASIC0.28□□□□□ -2.36
SYNE1Q8NF91 Y_RNA.534-201ENST00000384599 112 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms