Protein–RNA interactions for Protein: Q8NEL0

CCDC54, Coiled-coil domain-containing protein 54, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54Q8NEL0 FABP5P14-201ENST00000437273 393 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 CALM1P1-201ENST00000442082 433 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC244505.5-201ENST00000443639 207 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC116562.3-201ENST00000506136 177 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC008526.1-201ENST00000509149 338 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 SNORD27.1-201ENST00000516319 72 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 RNA5SP281-201ENST00000516504 135 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC068587.5-201ENST00000528506 175 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 ADI1P3-201ENST00000549509 470 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC087883.1-201ENST00000551882 391 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 LRRC37A5P-203ENST00000580181 585 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AL139286.2-201ENST00000606838 396 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC073114.1-201ENST00000612027 490 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC010678.1-201ENST00000614118 713 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC009509.4-201ENST00000619202 509 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC099842.1-201ENST00000619919 596 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 AC091932.3-201ENST00000624223 323 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 FARSBP1-201ENST00000435808 1778 ntBASIC1.87□□□□□ -2.11
CCDC54Q8NEL0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 U3.12-201ENST00000364498 214 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 RNU6-1280P-201ENST00000365211 107 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 RNU6-72P-201ENST00000384285 79 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 RNU2-3P-201ENST00000410144 191 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 RNA5SP270-201ENST00000411361 118 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 CYCSP33-201ENST00000414485 327 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 RNU6-717P-201ENST00000459076 104 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AP001025.1-201ENST00000486139 332 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC068781.1-201ENST00000488231 618 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 MTND3P25-201ENST00000509243 135 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC091965.2-201ENST00000512324 613 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC012213.3-201ENST00000577199 777 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 MIR4528-201ENST00000577763 90 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC008088.1-201ENST00000580993 280 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 MIR4775-201ENST00000581168 75 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC025165.5-201ENST00000602802 578 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 Z99497.2-201ENST00000603634 310 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 uc_338.14-201ENST00000613162 166 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AC108479.2-201ENST00000617314 601 ntBASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC54Q8NEL0 AL359854.1-201ENST00000614203 1594 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 OR56A5-201ENST00000340110 738 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 RNU6-748P-201ENST00000384648 107 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 BTF3P7-201ENST00000407097 488 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC003685.2-201ENST00000422795 395 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AL669831.1-202ENST00000428504 417 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 CETN4P-201ENST00000432407 469 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 GTF2IP13-201ENST00000438487 386 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC124916.1-201ENST00000444020 547 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AL118520.1-201ENST00000450770 291 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 SNRPFP4-201ENST00000456366 242 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AP002770.2-201ENST00000543613 532 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC079598.5-201ENST00000547460 117 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC027176.1-201ENST00000560204 514 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC026464.5-201ENST00000562497 722 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC009063.1-201ENST00000563342 702 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 MIR5002-201ENST00000584713 97 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 MIR4765-201ENST00000585007 77 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 MIR548AC-201ENST00000585049 88 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC098848.2-201ENST00000588023 330 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC119751.7-201ENST00000600494 245 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC009314.1-201ENST00000603871 304 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AL138889.2-201ENST00000603883 242 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC025811.1-201ENST00000604312 472 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 MIR98-201ENST00000606724 119 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AL158063.1-201ENST00000615349 536 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 MIR7157-201ENST00000635801 60 ntBASIC1.85□□□□□ -2.11
CCDC54Q8NEL0 AL354685.2-201ENST00000448218 1447 ntBASIC1.84□□□□□ -2.11
CCDC54Q8NEL0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC54Q8NEL0 MIR412-201ENST00000362142 91 ntBASIC1.84□□□□□ -2.11
CCDC54Q8NEL0 RNU6-181P-201ENST00000363225 107 ntBASIC1.84□□□□□ -2.11
CCDC54Q8NEL0 Y_RNA.159-201ENST00000363674 87 ntBASIC1.84□□□□□ -2.11
CCDC54Q8NEL0 SNORA62.1-201ENST00000364287 154 ntBASIC1.84□□□□□ -2.11
CCDC54Q8NEL0 MIR10A-201ENST00000385043 110 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms