Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC003071.1-201ENST00000451219 789 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 BTF3P15-201ENST00000455606 336 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 RNU7-180P-201ENST00000459240 63 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 snoU109.2-201ENST00000459316 135 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.2□□□□□ -1.9
USP38Q8NB14 AC132942.1-201ENST00000486753 483 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 HMGB1P30-201ENST00000492455 606 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 RPS27P26-201ENST00000494583 239 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 FAM92A1P2-202ENST00000504766 877 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.2□□□□□ -1.9
USP38Q8NB14 AC074344.1-201ENST00000512823 224 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 SUB1P1-201ENST00000524415 382 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 LINC00933-203ENST00000559812 219 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 AC024153.1-201ENST00000603103 365 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 AC007318.2-201ENST00000620999 243 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 FER-210ENST00000628534 558 ntTSL 5 BASIC3.2□□□□□ -1.9
USP38Q8NB14 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
USP38Q8NB14 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP38Q8NB14 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.2□□□□□ -1.9
USP38Q8NB14 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP38Q8NB14 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP38Q8NB14 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP38Q8NB14 RNA5SP99-201ENST00000364020 114 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 RNA5SP139-201ENST00000364340 117 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
USP38Q8NB14 RNU6-877P-201ENST00000383868 107 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 CIR1P3-201ENST00000405137 479 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 RN7SKP123-201ENST00000410732 291 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 AC023141.4-201ENST00000412031 328 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.19□□□□□ -1.9
USP38Q8NB14 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.19□□□□□ -1.9
USP38Q8NB14 AL591806.2-201ENST00000433122 173 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.19□□□□□ -1.9
USP38Q8NB14 PRPS1P1-201ENST00000445305 876 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 RPL7P12-201ENST00000446719 750 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.19□□□□□ -1.9
USP38Q8NB14 RPS29P21-201ENST00000496272 170 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.19□□□□□ -1.9
USP38Q8NB14 AC108210.2-201ENST00000503681 201 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.19□□□□□ -1.9
USP38Q8NB14 LRRC34P2-201ENST00000514850 553 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.19□□□□□ -1.9
USP38Q8NB14 AL645944.1-201ENST00000603857 493 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 DISC2.1-201ENST00000612827 205 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.19□□□□□ -1.9
USP38Q8NB14 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.19□□□□□ -1.9
USP38Q8NB14 MIR3688-2-201ENST00000636963 87 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.19□□□□□ -1.9
USP38Q8NB14 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP38Q8NB14 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
USP38Q8NB14 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP38Q8NB14 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP38Q8NB14 AC009487.2-201ENST00000420969 6821 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
USP38Q8NB14 RNU6-1303P-201ENST00000364841 107 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 Y_RNA.295-201ENST00000364918 102 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 SNORA67.4-201ENST00000384688 142 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 SNORA16.2-201ENST00000390991 127 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 RNU6-908P-201ENST00000410160 94 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 AL669831.1-202ENST00000428504 417 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 ARL5AP4-201ENST00000430731 512 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 GTF2IP13-201ENST00000438487 386 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 MTND3P16-201ENST00000452205 344 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.18□□□□□ -1.9
USP38Q8NB14 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.18□□□□□ -1.9
USP38Q8NB14 RPL21P99-201ENST00000480369 423 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 MTAPP1-201ENST00000489154 819 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.18□□□□□ -1.9
USP38Q8NB14 TBCAP3-201ENST00000512475 312 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.18□□□□□ -1.9
USP38Q8NB14 RNU6-581P-201ENST00000516214 105 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 MTND1P5-201ENST00000517906 940 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.18□□□□□ -1.9
USP38Q8NB14 AC022634.1-201ENST00000520765 532 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.18□□□□□ -1.9
USP38Q8NB14 AC007536.1-201ENST00000533382 349 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP38Q8NB14 AL121821.2-201ENST00000556081 394 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 AC025281.1-201ENST00000567026 265 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.18□□□□□ -1.9
USP38Q8NB14 RPL23AP78-201ENST00000599928 470 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 AP003465.2-201ENST00000602571 373 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 AP000907.4-201ENST00000604143 237 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 U2.17-201ENST00000611454 95 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
USP38Q8NB14 AP003400.5-201ENST00000624827 617 ntBASIC3.18□□□□□ -1.9
USP38Q8NB14 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.18□□□□□ -1.9
USP38Q8NB14 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP38Q8NB14 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
USP38Q8NB14 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.17□□□□□ -1.9
USP38Q8NB14 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP38Q8NB14 Y_RNA.89-201ENST00000363031 102 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP38Q8NB14 RNU6-482P-201ENST00000391068 107 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 MIR1289-2-201ENST00000408360 111 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.17□□□□□ -1.9
USP38Q8NB14 RNU6-193P-201ENST00000410977 107 ntBASIC3.17□□□□□ -1.9
USP38Q8NB14 OR9R1P-201ENST00000412200 877 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms