Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 VDAC1P3-201ENST00000434069 851 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 RPL23AP50-201ENST00000434149 455 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 NDUFB1P1-201ENST00000435191 180 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 SNRPEP9-201ENST00000436794 238 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AC099799.1-201ENST00000439809 192 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AC112492.4-201ENST00000456549 352 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 RPL17P19-201ENST00000489069 552 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 RNU6-475P-201ENST00000516073 104 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 RNU6-572P-201ENST00000516724 80 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 RNU6-264P-201ENST00000517134 104 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AC008011.1-201ENST00000545989 227 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 TGIF1P1-201ENST00000558095 802 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AC087499.8-201ENST00000578406 226 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 MIR3690-201ENST00000580266 75 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 MIR5187-201ENST00000583479 76 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AC009314.1-201ENST00000603871 304 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AP000787.2-201ENST00000604432 568 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AC018889.1-201ENST00000605372 397 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AL161629.2-201ENST00000615347 275 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AC138305.3-201ENST00000624988 240 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AL606534.2-204ENST00000635008 178 ntBASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
PNLDC1Q8NA58 AC091152.2-201ENST00000591628 2569 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 RPL9P7-201ENST00000330965 580 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.193-201ENST00000363979 102 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 RNU6-99P-201ENST00000364721 107 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.452-201ENST00000384202 108 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 MIR325-201ENST00000385260 98 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AL138885.1-201ENST00000405921 675 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 RNU2-68P-201ENST00000410878 191 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AC098614.2-201ENST00000426040 255 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AL590383.1-201ENST00000428602 75 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AL353997.1-201ENST00000432936 108 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AL513043.1-201ENST00000439124 535 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AL031274.1-201ENST00000450334 232 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AL353752.1-201ENST00000454946 260 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 RPL9P9-202ENST00000466501 579 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 RN7SL542P-201ENST00000467147 294 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AC015911.1-201ENST00000495111 156 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 RNU6-703P-201ENST00000516946 107 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 CASP1P1-201ENST00000526345 212 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 MIR3149-201ENST00000584629 83 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 AL645944.1-201ENST00000603857 493 ntBASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PNLDC1Q8NA58 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.47-201ENST00000362697 108 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 Z98749.2-208ENST00000381646 500 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 Y_RNA.577-201ENST00000384794 101 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 RNU6-823P-201ENST00000391042 103 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 RNU6-1197P-201ENST00000391183 107 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AL591034.2-201ENST00000402839 359 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 RNU2-37P-201ENST00000410695 177 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AC114482.1-201ENST00000418010 247 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AC096644.2-201ENST00000429278 159 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 NDUFB4P6-201ENST00000436819 366 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AL078601.1-201ENST00000444542 271 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AL133547.1-201ENST00000448546 220 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AL133162.1-201ENST00000463228 453 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 ACA59.1-201ENST00000515966 143 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 RNU2-58P-201ENST00000516403 183 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 RNU6-579P-201ENST00000516879 102 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 RNA5SP291-201ENST00000517222 105 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AC103996.1-201ENST00000555468 102 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 MIR1254-2-201ENST00000579553 63 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AC008121.1-201ENST00000603244 268 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AC005046.1-201ENST00000608515 625 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 AC099506.2-201ENST00000623074 221 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 CR392039.5-201ENST00000623201 510 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 MIR4272-201ENST00000635924 64 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 U2.21-201ENST00000637295 81 ntBASIC3.12□□□□□ -1.91
PNLDC1Q8NA58 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms