Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 RNU6-1088P-201ENST00000516850 104 ntBASIC3.12□□□□□ -1.91
EXD3Q8N9H8 GLYCAM1-201ENST00000546596 285 ntBASIC3.12□□□□□ -1.91
EXD3Q8N9H8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.12□□□□□ -1.91
EXD3Q8N9H8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.12□□□□□ -1.91
EXD3Q8N9H8 AC007938.3-201ENST00000604965 623 ntBASIC3.12□□□□□ -1.91
EXD3Q8N9H8 AC099778.2-201ENST00000610904 211 ntBASIC3.12□□□□□ -1.91
EXD3Q8N9H8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.12□□□□□ -1.91
EXD3Q8N9H8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EXD3Q8N9H8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.12□□□□□ -1.91
EXD3Q8N9H8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.12□□□□□ -1.91
EXD3Q8N9H8 AC090574.1-201ENST00000623186 233 ntBASIC3.12□□□□□ -1.91
EXD3Q8N9H8 AL133216.2-202ENST00000634512 349 ntBASIC3.12□□□□□ -1.91
EXD3Q8N9H8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
EXD3Q8N9H8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.12□□□□□ -1.91
EXD3Q8N9H8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.12□□□□□ -1.91
EXD3Q8N9H8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
EXD3Q8N9H8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
EXD3Q8N9H8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
EXD3Q8N9H8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 SNORD14B-201ENST00000364533 90 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 RNU1-73P-201ENST00000383971 164 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 MIR548K-201ENST00000408406 116 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 MIR548F5-201ENST00000408421 86 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AL096701.2-201ENST00000416920 238 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 MTCO2P27-201ENST00000420740 428 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 PGBD4P6-201ENST00000421501 610 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 BTF3P15-201ENST00000455606 336 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 RPL26P9-201ENST00000457466 433 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AC104472.2-201ENST00000469035 601 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AP002884.2-201ENST00000471647 395 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AC113155.1-201ENST00000511141 769 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AC010265.1-201ENST00000513509 211 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 RN7SKP24-201ENST00000515888 284 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 SNORA70.19-201ENST00000516717 90 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 RNU6-928P-201ENST00000516876 104 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 RNU6-703P-201ENST00000516946 107 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AC109479.2-201ENST00000517842 174 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 COPS8P3-201ENST00000526024 482 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 APOOP1-201ENST00000604695 592 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 AC010378.1-201ENST00000619270 362 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
EXD3Q8N9H8 ZNF519P1-201ENST00000449011 1626 ntBASIC3.11□□□□□ -1.91
EXD3Q8N9H8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AL513302.2-201ENST00000562313 1842 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 Y_RNA.135-201ENST00000363439 95 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 RNU6-593P-201ENST00000364716 112 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 Y_RNA.474-201ENST00000384341 102 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 RNU6-166P-201ENST00000384371 107 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 RNU6-1297P-201ENST00000384415 104 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 Y_RNA.535-201ENST00000384612 99 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AL592148.1-201ENST00000413568 445 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AL645568.3-201ENST00000433683 316 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 SSXP4-201ENST00000451349 245 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AC130509.1-201ENST00000464158 433 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AC087884.1-201ENST00000469738 328 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 RPS4XP22-201ENST00000480755 780 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 RNU1-54P-201ENST00000517181 120 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 FAM157A-202ENST00000615155 405 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 SCARNA4-202ENST00000625402 129 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 AC007496.3-201ENST00000624987 3443 ntBASIC3.1□□□□□ -1.91
EXD3Q8N9H8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
EXD3Q8N9H8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
EXD3Q8N9H8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.09□□□□□ -1.91
EXD3Q8N9H8 RNU4-79P-201ENST00000362764 141 ntBASIC3.09□□□□□ -1.91
EXD3Q8N9H8 Y_RNA.67-201ENST00000362870 100 ntBASIC3.09□□□□□ -1.91
EXD3Q8N9H8 SNORD3E-201ENST00000362899 217 ntBASIC3.09□□□□□ -1.91
EXD3Q8N9H8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EXD3Q8N9H8 Y_RNA.509-201ENST00000384506 99 ntBASIC3.09□□□□□ -1.91
EXD3Q8N9H8 RN7SKP158-201ENST00000410453 326 ntBASIC3.09□□□□□ -1.91
EXD3Q8N9H8 AC099548.1-201ENST00000421443 426 ntBASIC3.09□□□□□ -1.91
EXD3Q8N9H8 OOSP1P1-201ENST00000423265 274 ntBASIC3.09□□□□□ -1.91
EXD3Q8N9H8 RPS3AP52-201ENST00000435639 297 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms