Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 RNU6-1010P-201ENST00000362757 107 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 SNORA16B-201ENST00000364674 135 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 SNORA24.1-201ENST00000384401 135 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 Y_RNA.560-201ENST00000384689 102 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 MIR95-201ENST00000385072 81 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 Y_RNA.598-201ENST00000410480 95 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 RNU6-1140P-201ENST00000410517 106 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 MTND1P30-201ENST00000441241 901 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 IPO7P1-201ENST00000442031 636 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 AC006026.2-201ENST00000457376 180 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 RNU2-53P-201ENST00000516257 147 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 AL031274.2-201ENST00000599419 203 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 AL022161.1-201ENST00000604390 213 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 NDUFA8P1-201ENST00000605525 367 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 MIR219B-201ENST00000637023 88 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 AC099654.13-201ENST00000639774 207 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 HAUS6P2-201ENST00000433254 2404 ntBASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 SNORA25B-201ENST00000365507 128 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 SNORA20.2-201ENST00000383922 131 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 SNORD116-20-201ENST00000384529 92 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 MIR186-201ENST00000384988 86 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AL591416.1-201ENST00000404015 867 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 MORF4L1P6-201ENST00000418771 268 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 MTND4P20-201ENST00000424125 869 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 MTND5P25-201ENST00000430499 799 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 CALM1P1-201ENST00000442082 433 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AC055731.1-201ENST00000474387 401 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 Y_RNA.673-201ENST00000516306 88 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 RNU6-586P-201ENST00000517265 104 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AL670379.2-201ENST00000604983 252 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AL670379.4-201ENST00000605279 254 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 uc_338.15-201ENST00000615470 191 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AC090517.3-201ENST00000625170 141 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AC019226.2-201ENST00000625973 424 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 AC092881.1-201ENST00000638218 2733 ntBASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HDDC3Q8N4P3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AL356292.1-201ENST00000283110 373 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 OR4G2P-201ENST00000328113 903 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 RNU6-942P-201ENST00000363002 107 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 RNU6-179P-201ENST00000363350 107 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 RNU6-487P-201ENST00000365430 104 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 SNORA64-201ENST00000384674 134 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AL591034.2-201ENST00000402839 359 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 C1DP2-201ENST00000418167 426 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 Z99497.1-201ENST00000421282 135 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AC008267.5-201ENST00000424928 265 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 GPM6BP3-201ENST00000442797 145 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 KATNBL1P6-201ENST00000453433 915 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 RNU7-125P-201ENST00000458760 62 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 Y_RNA.687-201ENST00000516558 91 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 RNU2-19P-201ENST00000517288 84 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AC022616.3-201ENST00000523940 148 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AP000889.2-201ENST00000532684 490 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 CR383656.8-201ENST00000549046 145 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 ZNF321P-202ENST00000550843 495 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AC093249.1-201ENST00000567049 203 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AC093424.1-201ENST00000604999 338 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AC092354.1-201ENST00000606057 376 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AL451064.1-201ENST00000607718 471 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AL133173.2-201ENST00000614270 90 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AC009090.3-201ENST00000616553 565 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AL031601.2-202ENST00000622650 282 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 AC007336.1-201ENST00000576365 3828 ntBASIC2.23□□□□□ -2.05
HDDC3Q8N4P3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HDDC3Q8N4P3 RNU1-23P-201ENST00000363361 144 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms