Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SNORA31.17-201ENST00000516953 127 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AC242498.1-201ENST00000604134 111 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AC091152.3-201ENST00000604227 325 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AC018618.2-201ENST00000604770 446 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AC243994.1-201ENST00000618627 109 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AC022513.1-201ENST00000624512 117 ntBASIC0.49□□□□□ -2.33
VPS8Q8N3P4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.49□□□□□ -2.33
VPS8Q8N3P4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
VPS8Q8N3P4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.48□□□□□ -2.33
VPS8Q8N3P4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.48□□□□□ -2.33
VPS8Q8N3P4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.48□□□□□ -2.33
VPS8Q8N3P4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.48□□□□□ -2.33
VPS8Q8N3P4 AL109755.1-201ENST00000401791 649 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 AL353706.1-201ENST00000436728 494 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 TRBVA-201ENST00000498804 316 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.47□□□□□ -2.33
VPS8Q8N3P4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.47□□□□□ -2.33
VPS8Q8N3P4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.47□□□□□ -2.33
VPS8Q8N3P4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.47□□□□□ -2.33
VPS8Q8N3P4 AC027335.2-201ENST00000624030 375 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 Z69720.2-201ENST00000624755 279 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 AC092608.3-201ENST00000625017 386 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.47□□□□□ -2.33
VPS8Q8N3P4 Y_RNA.178-201ENST00000363832 102 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 SNORA48.1-201ENST00000390879 135 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.47□□□□□ -2.33
VPS8Q8N3P4 MTND1P33-201ENST00000446251 917 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.47□□□□□ -2.33
VPS8Q8N3P4 AC012213.3-201ENST00000577199 777 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 MTCO2P2-201ENST00000591258 225 ntBASIC0.47□□□□□ -2.33
VPS8Q8N3P4 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 RNU6-1164P-201ENST00000364428 107 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 SNORD14D-201ENST00000384390 87 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 RNU6-1065P-201ENST00000384513 106 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.46□□□□□ -2.34
VPS8Q8N3P4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.46□□□□□ -2.34
VPS8Q8N3P4 GDI2P1-201ENST00000429312 1336 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 NANOGP2-201ENST00000435391 727 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.46□□□□□ -2.34
VPS8Q8N3P4 AC244505.3-201ENST00000454598 187 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 MEMO1P3-201ENST00000459811 302 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 AC087477.1-201ENST00000465747 340 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.46□□□□□ -2.34
VPS8Q8N3P4 AC022616.8-201ENST00000533569 253 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 AL109620.1-201ENST00000618738 1197 ntBASIC0.46□□□□□ -2.34
VPS8Q8N3P4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
VPS8Q8N3P4 MIR1262-201ENST00000408276 93 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 VN1R42P-201ENST00000424651 344 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 PTGES3P4-201ENST00000426243 356 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.45□□□□□ -2.34
VPS8Q8N3P4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS8Q8N3P4 MTND5P8-201ENST00000449817 1083 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 AC114982.2-201ENST00000461396 358 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.45□□□□□ -2.34
VPS8Q8N3P4 SNORA62.5-201ENST00000516634 120 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 RNU11-2P-201ENST00000516898 142 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.45□□□□□ -2.34
VPS8Q8N3P4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 AC008088.1-201ENST00000580993 280 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 AP000654.2-201ENST00000605633 586 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 AF129408.1-201ENST00000608767 431 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 MIR6718-201ENST00000616153 80 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 MTND1P37-201ENST00000636562 264 ntBASIC0.45□□□□□ -2.34
VPS8Q8N3P4 EIF1P1-201ENST00000421436 341 ntBASIC0.44□□□□□ -2.34
VPS8Q8N3P4 AC073614.1-201ENST00000438690 650 ntBASIC0.44□□□□□ -2.34
VPS8Q8N3P4 RNU6-197P-201ENST00000516680 100 ntBASIC0.44□□□□□ -2.34
VPS8Q8N3P4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.44□□□□□ -2.34
VPS8Q8N3P4 BNIP3P16-201ENST00000589779 534 ntBASIC0.44□□□□□ -2.34
VPS8Q8N3P4 AC024257.5-201ENST00000612739 531 ntBASIC0.44□□□□□ -2.34
VPS8Q8N3P4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.44□□□□□ -2.34
VPS8Q8N3P4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.43□□□□□ -2.34
VPS8Q8N3P4 AC138393.1-203ENST00000327086 343 ntBASIC0.43□□□□□ -2.34
VPS8Q8N3P4 MIR302D-201ENST00000362275 68 ntBASIC0.43□□□□□ -2.34
VPS8Q8N3P4 SNORA63.3-201ENST00000362682 132 ntBASIC0.43□□□□□ -2.34
VPS8Q8N3P4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.43□□□□□ -2.34
VPS8Q8N3P4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.43□□□□□ -2.34
VPS8Q8N3P4 BET1P1-201ENST00000482276 359 ntBASIC0.43□□□□□ -2.34
VPS8Q8N3P4 HMGN1P30-201ENST00000589286 268 ntBASIC0.43□□□□□ -2.34
VPS8Q8N3P4 AC004067.1-201ENST00000608733 700 ntBASIC0.43□□□□□ -2.34
VPS8Q8N3P4 AC127391.1-201ENST00000411737 98 ntBASIC0.42□□□□□ -2.34
VPS8Q8N3P4 MTCYBP38-201ENST00000417160 1123 ntBASIC0.42□□□□□ -2.34
VPS8Q8N3P4 AC010409.1-201ENST00000487382 476 ntBASIC0.42□□□□□ -2.34
VPS8Q8N3P4 RNVU1-2-201ENST00000516326 135 ntBASIC0.42□□□□□ -2.34
VPS8Q8N3P4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.42□□□□□ -2.34
VPS8Q8N3P4 NIFKP8-201ENST00000560500 874 ntBASIC0.42□□□□□ -2.34
VPS8Q8N3P4 AC008751.2-201ENST00000597885 980 ntBASIC0.42□□□□□ -2.34
VPS8Q8N3P4 BNIP3P27-201ENST00000599991 412 ntBASIC0.42□□□□□ -2.34
VPS8Q8N3P4 AC011939.3-201ENST00000613686 466 ntBASIC0.42□□□□□ -2.34
VPS8Q8N3P4 AP005212.4-201ENST00000614206 710 ntBASIC0.42□□□□□ -2.34
VPS8Q8N3P4 RNU6-152P-201ENST00000384037 107 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 Y_RNA.433-201ENST00000384089 102 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 RNA5SP63-201ENST00000391225 112 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 AL121978.1-201ENST00000402778 359 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 RNU2-33P-201ENST00000410344 192 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.41□□□□□ -2.34
VPS8Q8N3P4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.41□□□□□ -2.34
VPS8Q8N3P4 MTND4P6-201ENST00000438297 472 ntBASIC0.41□□□□□ -2.34
VPS8Q8N3P4 AC079776.3-201ENST00000450665 370 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms