Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNY3P14-201ENST00000384309 102 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 RNU6-510P-201ENST00000391239 108 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 PGBD4P6-201ENST00000421501 610 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 AL365496.1-201ENST00000426885 215 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 MTND4P18-201ENST00000447010 465 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 TRBVA-201ENST00000498804 316 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 AL121579.1-201ENST00000555129 305 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 NUTF2P8-201ENST00000604593 363 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
BEST3Q8N1M1 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.79□□□□□ -1.96
BEST3Q8N1M1 ADAM3A-203ENST00000461344 2157 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 RNU1-105P-201ENST00000363470 161 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 SNORA32.2-201ENST00000384049 122 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 MIR518D-201ENST00000385014 87 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 U3.37-201ENST00000408528 213 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 RN7SKP123-201ENST00000410732 291 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC023141.4-201ENST00000412031 328 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 RPS15AP5-201ENST00000436276 388 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC107083.1-201ENST00000439643 279 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 RPS12P18-201ENST00000442381 270 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 RPL7P12-201ENST00000446719 750 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC091179.1-201ENST00000461606 579 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC087884.1-201ENST00000469738 328 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC117440.1-201ENST00000474107 571 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC113155.1-201ENST00000511141 769 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 RN7SKP256-201ENST00000517201 314 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 BTF3P12-201ENST00000519620 469 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC087854.1-201ENST00000519706 414 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC022634.1-201ENST00000520765 532 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 DNAJC8P1-201ENST00000554535 372 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AL033523.1-201ENST00000605153 153 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 CTHRC1P1-201ENST00000605383 469 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 AL121757.2-201ENST00000611223 313 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 MIR7106-201ENST00000612419 65 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 SCARNA4-202ENST00000625402 129 ntBASIC2.78□□□□□ -1.96
BEST3Q8N1M1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.78□□□□□ -1.96
BEST3Q8N1M1 CDC27P3-201ENST00000635418 1910 ntBASIC2.78□□□□□ -1.97
BEST3Q8N1M1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 CBX3P1-201ENST00000325243 554 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 RNU6-254P-201ENST00000363377 107 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 SNORA72.1-201ENST00000363485 129 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 RNU6-799P-201ENST00000363567 107 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 Y_RNA.303-201ENST00000364998 94 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 RNU6-898P-201ENST00000365627 104 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 Y_RNA.414-201ENST00000384011 101 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 RNU6-767P-201ENST00000384132 107 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 RNU6-72P-201ENST00000384285 79 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC016831.2-201ENST00000417179 352 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC098614.3-201ENST00000438957 440 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 NIPA2P5-201ENST00000452282 464 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 PMCHL2-203ENST00000457791 237 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 RNU7-138P-201ENST00000459479 64 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC104472.2-201ENST00000469035 601 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC117503.1-201ENST00000472241 394 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 RPS29P26-201ENST00000477483 171 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC046134.1-201ENST00000514454 666 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC087241.2-201ENST00000535801 324 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 MIR5692C1-201ENST00000585309 91 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 APOOP1-201ENST00000604695 592 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AL357078.3-201ENST00000607528 618 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC009248.2-201ENST00000619826 254 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 Z69720.2-201ENST00000624755 279 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
BEST3Q8N1M1 AC009487.2-201ENST00000420969 6821 ntBASIC2.77□□□□□ -1.97
BEST3Q8N1M1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms