Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC126118.1-201ENST00000607744 628 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AP003400.5-201ENST00000624827 617 ntBASIC2.05□□□□□ -2.08
CCDC65Q8IXS2 AC073343.1-201ENST00000328239 651 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 Y_RNA.560-201ENST00000384689 102 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AL031577.2-201ENST00000404133 280 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AL133475.1-201ENST00000404414 305 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AC097463.2-201ENST00000421074 142 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 Z75746.1-201ENST00000440243 2080 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 UBE2D3P4-201ENST00000441973 436 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AC003071.1-201ENST00000451219 789 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AC018437.1-201ENST00000492214 406 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 RNA5SP112-201ENST00000515937 99 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 RNA5SP182-201ENST00000516064 82 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 RNU5B-3P-201ENST00000516601 115 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 RNU2-46P-201ENST00000517038 113 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 RNU6-232P-201ENST00000517144 64 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AC022616.3-201ENST00000523940 148 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 AC007375.1-201ENST00000554513 578 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 RPL21P5-201ENST00000554662 472 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 MIR548AB-201ENST00000584917 84 ntBASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC65Q8IXS2 MTND4P4-201ENST00000439033 1366 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 RNU6-942P-201ENST00000363002 107 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 RNU6-395P-201ENST00000365662 106 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 SNORA24.1-201ENST00000384401 135 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 RNU1-148P-201ENST00000384472 162 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 MIR558-201ENST00000384920 94 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 RPL23AP32-201ENST00000395315 459 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 BTF3P15-201ENST00000455606 336 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AL583843.1-201ENST00000456070 346 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 RPL23AP42-201ENST00000471152 471 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 RPL36AP48-201ENST00000485521 314 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AF213884.2-201ENST00000510417 903 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC091965.2-201ENST00000512324 613 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 Y_RNA.672-201ENST00000516289 104 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 MIR892C-201ENST00000516410 77 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC106038.2-201ENST00000520706 568 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC110588.1-201ENST00000559699 137 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AL670379.10-201ENST00000604330 253 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AL670379.9-201ENST00000605428 253 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC092354.1-201ENST00000606057 376 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AC024940.5-201ENST00000622889 474 ntBASIC2.03□□□□□ -2.08
CCDC65Q8IXS2 AP006437.1-201ENST00000641440 3685 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL353621.1-201ENST00000418219 243 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL160275.3-201ENST00000423876 471 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 RPL7P34-201ENST00000433316 712 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AC119618.1-201ENST00000434191 222 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL353689.1-201ENST00000438895 199 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 MTND6P13-201ENST00000443510 523 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL136380.1-201ENST00000447970 162 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AC112771.1-201ENST00000463581 102 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 BZW1P2-201ENST00000473537 826 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 MTND1P22-201ENST00000510572 951 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AC112206.3-201ENST00000514578 389 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 RNU6-123P-201ENST00000516163 102 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL133241.1-201ENST00000556832 487 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AC092325.1-201ENST00000566449 554 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL355297.2-201ENST00000604792 129 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AC087045.1-201ENST00000605856 382 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AC012409.4-201ENST00000612923 249 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL603839.4-201ENST00000624658 1005 ntBASIC2.02□□□□□ -2.09
CCDC65Q8IXS2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC65Q8IXS2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms