Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 AC024153.1-201ENST00000603103 365 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 MIR3688-2-201ENST00000636963 87 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 CDC27P3-201ENST00000635418 1910 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AC092435.3-201ENST00000565538 3654 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 SNORD3E-201ENST00000362899 217 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 Z98749.2-208ENST00000381646 500 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 SNORA16.2-201ENST00000390991 127 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AL360182.1-201ENST00000397433 468 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 MIR1277-201ENST00000408536 78 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 RNU2-52P-201ENST00000410680 190 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 RNU6-1068P-201ENST00000410958 103 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AL592148.1-201ENST00000413568 445 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 RPL7P10-201ENST00000417407 739 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.17□□□□□ -1.9
HERC6Q8IVU3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.17□□□□□ -1.9
HERC6Q8IVU3 OSTCP8-201ENST00000445117 448 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 MTND3P16-201ENST00000452205 344 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AC092989.1-201ENST00000481235 277 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 FAM92A1P2-202ENST00000504766 877 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AC116655.1-201ENST00000508324 901 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AP004607.1-201ENST00000524456 203 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AL133241.1-201ENST00000556832 487 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 MTCO3P23-201ENST00000561363 289 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AL138976.2-201ENST00000563989 694 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 MIR4424-201ENST00000585257 86 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AC008739.2-201ENST00000597006 317 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.17□□□□□ -1.9
HERC6Q8IVU3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 OR4G1P-203ENST00000641984 1631 ntBASIC3.17□□□□□ -1.9
HERC6Q8IVU3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HERC6Q8IVU3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.17□□□□□ -1.9
HERC6Q8IVU3 AC008264.2-201ENST00000610193 3731 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 Y_RNA.89-201ENST00000363031 102 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 Y_RNA.295-201ENST00000364918 102 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 PTGES3P4-201ENST00000426243 356 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AC009414.1-201ENST00000427200 443 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 MTCO2P3-201ENST00000442543 421 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AC092001.1-201ENST00000453012 261 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AC091179.1-201ENST00000461606 579 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 SEM1P1-201ENST00000506694 209 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 MTCO3P9-201ENST00000506989 781 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 RNA5SP385-201ENST00000515947 110 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 CYCSP27-201ENST00000527643 293 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AP003400.5-201ENST00000624827 617 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 AC093831.2-201ENST00000624393 3427 ntBASIC3.16□□□□□ -1.9
HERC6Q8IVU3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HERC6Q8IVU3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.9
HERC6Q8IVU3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
HERC6Q8IVU3 Y_RNA.38-201ENST00000362617 102 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 RNU6-38P-201ENST00000384085 107 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 MIR147B-201ENST00000390185 80 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 RNA5SP118-201ENST00000410385 109 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 BX682237.1-201ENST00000415016 335 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 PGBD4P6-201ENST00000421501 610 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 MTND1P2-201ENST00000430604 821 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AL365400.1-201ENST00000431854 640 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 ERLEC1P1-201ENST00000433806 578 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 WASF1P1-201ENST00000447560 1131 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AL513124.1-201ENST00000450410 614 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 RNU6-333P-201ENST00000459117 107 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 RN7SL75P-201ENST00000461926 281 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AC107626.1-201ENST00000471084 183 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 GZMAP1-201ENST00000503054 631 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.15□□□□□ -1.91
HERC6Q8IVU3 RNU1-86P-201ENST00000516108 154 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 RNU6-581P-201ENST00000516214 105 ntBASIC3.15□□□□□ -1.91
HERC6Q8IVU3 RNU1-107P-201ENST00000516617 154 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms