Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 DPH3P2-201ENST00000422618 250 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 AC137499.1-201ENST00000427602 88 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 RPS24P1-201ENST00000438550 371 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 AC124916.1-201ENST00000444020 547 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 AC003071.1-201ENST00000451219 789 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 RPL30P6-201ENST00000475925 342 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 AC018437.1-201ENST00000492214 406 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 HMGB3P17-201ENST00000504195 649 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 FABP5P5-201ENST00000515537 406 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 SCARNA24.1-201ENST00000516465 137 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 AC009159.2-201ENST00000617603 606 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 AF246928.1-201ENST00000623768 87 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 AC079248.2-201ENST00000623779 326 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 AC092656.1-203ENST00000624134 423 ntBASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC50Q8IVM0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 SNORD14B-201ENST00000364533 90 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 RNU6-384P-201ENST00000364900 104 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 AL031577.2-201ENST00000404133 280 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 RNU6-195P-201ENST00000411352 109 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 AC008267.5-201ENST00000424928 265 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 AL445646.1-201ENST00000431784 216 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 RPL7P34-201ENST00000433316 712 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 CALM1P1-201ENST00000442082 433 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 RNA5SP233-201ENST00000459153 113 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 AC055731.1-201ENST00000474387 401 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 MED28P2-201ENST00000475771 317 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 AC008521.1-201ENST00000587471 187 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 AC093788.1-201ENST00000609356 927 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 MIR5739-201ENST00000619803 80 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 AL157786.1-207ENST00000627771 695 ntBASIC2□□□□□ -2.09
CCDC50Q8IVM0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC50Q8IVM0 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC50Q8IVM0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC50Q8IVM0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CCDC50Q8IVM0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 MIR412-201ENST00000362142 91 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U8.3-201ENST00000363321 132 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 RNU6-61P-201ENST00000365528 109 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 RNU6-72P-201ENST00000384285 79 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 Y_RNA.500-201ENST00000384466 111 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 RNU6-1179P-201ENST00000384667 107 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 RNU2-2P-201ENST00000410396 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 Y_RNA.598-201ENST00000410480 95 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 RNU2-63P-201ENST00000410792 194 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 RNA5SP270-201ENST00000411361 118 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 Z99497.1-201ENST00000421282 135 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AL139413.1-201ENST00000421309 217 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 PGBD4P6-201ENST00000421501 610 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AC000111.3-201ENST00000433478 193 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 MTND1P30-201ENST00000441241 901 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 MTND6P13-201ENST00000443510 523 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 CKS1BP2-201ENST00000497342 240 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AC117522.1-201ENST00000509821 380 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AC106038.2-201ENST00000520706 568 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AC024614.2-201ENST00000577584 372 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 MIR548AC-201ENST00000585049 88 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 BNIP3P30-201ENST00000601184 574 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AC092354.1-201ENST00000606057 376 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AL139286.2-201ENST00000606838 396 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AL360219.1-201ENST00000610230 366 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AC087683.2-201ENST00000611384 326 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.15-201ENST00000611544 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.16-201ENST00000613119 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.12-201ENST00000613778 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.20-201ENST00000613956 192 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.9-201ENST00000615427 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.11-201ENST00000616345 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.2-201ENST00000616535 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.3-201ENST00000617785 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.19-201ENST00000618602 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 RNU2-1-201ENST00000618664 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.6-201ENST00000619225 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.5-201ENST00000619465 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 U2.10-201ENST00000620268 191 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AC091932.3-201ENST00000624223 323 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 AC007494.3-201ENST00000624660 743 ntBASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC50Q8IVM0 MTND4P4-201ENST00000439033 1366 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 AC131280.1-202ENST00000624067 4211 ntBASIC1.98□□□□□ -2.09
CCDC50Q8IVM0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms