Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 MTATP8P1-201ENST00000467115 207 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 FO393415.2-201ENST00000480085 343 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 AC105758.1-201ENST00000506038 399 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 RNU6-612P-201ENST00000516909 102 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 SNORA70.24-201ENST00000517233 118 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 AL161670.1-201ENST00000554348 137 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 LINC00933-203ENST00000559812 219 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 MIR3922-201ENST00000585192 84 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 AC008962.1-201ENST00000605729 304 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 AL021879.1-201ENST00000611756 288 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 AC091953.5-201ENST00000622919 233 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 AC138627.2-201ENST00000624202 601 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 HSPA8P1-201ENST00000425843 1833 ntBASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RUFY4Q6ZNE9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 SRP72P2-201ENST00000344851 1979 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 RNU4-42P-201ENST00000364738 142 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 SNORD14.1-201ENST00000365609 90 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 Y_RNA.574-201ENST00000384766 95 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 MIR888-201ENST00000401186 77 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 DPH3P2-201ENST00000422618 250 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 AL731563.1-201ENST00000442202 214 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 HIGD1AP2-201ENST00000446367 280 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 AC010265.1-201ENST00000513509 211 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 CASP1P1-201ENST00000526345 212 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 CYCSP39-201ENST00000565821 309 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 AC110741.2-201ENST00000605278 268 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 AC007656.2-201ENST00000624902 4547 ntBASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RUFY4Q6ZNE9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
RUFY4Q6ZNE9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 Y_RNA.48-201ENST00000362710 103 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-227P-201ENST00000362865 103 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RNU1-18P-201ENST00000363062 164 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 SNORA63.7-201ENST00000365579 123 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-574P-201ENST00000384265 107 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 Y_RNA.533-201ENST00000384596 114 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 MIR491-201ENST00000384877 84 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 MT-TG-201ENST00000387429 68 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-700P-201ENST00000391043 107 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 MTCYBP2-201ENST00000407745 171 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 MIR1252-201ENST00000408861 65 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RNA5SP239-201ENST00000410218 129 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 Y_RNA.618-201ENST00000410949 107 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RHEBP3-201ENST00000411920 351 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AC007098.1-201ENST00000420122 367 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 HMGN2P30-201ENST00000423237 256 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RPL37P4-201ENST00000448908 268 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 U8.20-201ENST00000459445 131 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AC084357.1-201ENST00000473404 255 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RPL30P10-201ENST00000488148 337 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AC110794.1-201ENST00000505816 425 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-911P-201ENST00000516523 104 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-1183P-201ENST00000517054 60 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AP004607.1-201ENST00000524456 203 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 HMGB1P14-201ENST00000557424 591 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AC004584.2-201ENST00000570407 410 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 MIR5187-201ENST00000583479 76 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AL158827.2-201ENST00000602494 330 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AC024153.1-201ENST00000603103 365 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 RNU1-30P-201ENST00000606575 163 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AC096577.2-201ENST00000611455 153 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AL591424.2-201ENST00000617023 128 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AL691447.3-201ENST00000635020 330 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 AC032011.1-201ENST00000611703 1549 ntBASIC4.21□□□□□ -1.74
RUFY4Q6ZNE9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 AC008725.1-201ENST00000605123 2263 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-78P-201ENST00000362897 107 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-778P-201ENST00000363269 103 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 RNA5SP51-201ENST00000364750 119 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-702P-201ENST00000364982 107 ntBASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RUFY4Q6ZNE9 RNU6-784P-201ENST00000384330 106 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms