Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RN7SKP57-201ENST00000517248 293 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 AC010620.2-201ENST00000600135 313 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 AL713866.2-201ENST00000603579 219 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 AL121917.1-203ENST00000605534 577 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 AC132825.6-201ENST00000638861 357 ntBASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNKSR3Q6P9H4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.16-201ENST00000362421 102 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.111-201ENST00000363248 100 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-595P-201ENST00000363944 107 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.324-201ENST00000365165 102 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.506-201ENST00000384494 102 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.534-201ENST00000384599 112 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 MIR3074-201ENST00000384885 81 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AL353621.1-201ENST00000418219 243 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AC096920.1-201ENST00000423991 241 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 VDAC1P3-201ENST00000434069 851 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AC092573.2-201ENST00000434546 243 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 RPL23AP22-201ENST00000437556 453 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AC069285.2-201ENST00000440210 275 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AC010469.2-201ENST00000496412 480 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 RAC1P2-201ENST00000511164 579 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AC067942.3-201ENST00000512025 362 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AC090281.1-201ENST00000523019 276 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AC004024.1-201ENST00000549244 247 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AC136932.1-201ENST00000574771 208 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AC005951.2-201ENST00000576282 495 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 MIR4643-201ENST00000577473 78 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 MIR5696-201ENST00000578474 85 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 ZNF299P-201ENST00000406845 1804 ntBASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CNKSR3Q6P9H4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 RNU1-33P-201ENST00000364249 162 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 RNU6-1317P-201ENST00000364582 104 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 SNORD115-46-201ENST00000390982 71 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 MIR1298-201ENST00000408783 112 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 AC007098.1-201ENST00000420122 367 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 HLA-N-201ENST00000437516 135 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 SNORA71B-202ENST00000439232 272 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 SNORA59A-201ENST00000459326 152 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 RPS29P2-201ENST00000479278 136 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 RNU1-86P-201ENST00000516108 154 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 RNU1-107P-201ENST00000516617 154 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 Y_RNA.713-201ENST00000517013 96 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 AC107016.1-201ENST00000550463 337 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 MIR548AC-201ENST00000585049 88 ntBASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.03□□□□□ -1.76
CNKSR3Q6P9H4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.03□□□□□ -1.77
CNKSR3Q6P9H4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CNKSR3Q6P9H4 Z75746.1-201ENST00000440243 2080 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 AC008725.1-201ENST00000605123 2263 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 RNU6-1266P-201ENST00000362794 105 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 RNA5SP424-201ENST00000390988 115 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 RNA5SP494-201ENST00000410653 129 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 AC063979.1-201ENST00000415539 377 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 AL136097.1-201ENST00000456945 913 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 Y_RNA.644-201ENST00000459006 113 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 AC008155.2-201ENST00000464337 397 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 RN7SL807P-201ENST00000470923 297 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 SUMO2P6-201ENST00000505273 288 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 RNU6-1338P-201ENST00000516328 91 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 Y_RNA.674-201ENST00000516362 113 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 AC022868.1-201ENST00000517767 391 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 AC008489.1-201ENST00000524271 483 ntBASIC4.02□□□□□ -1.77
CNKSR3Q6P9H4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms