Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.14-201ENST00000362415 103 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.60-201ENST00000362831 98 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 RNU6-806P-201ENST00000365147 105 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 RNU4-70P-201ENST00000384579 139 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 RNU2-33P-201ENST00000410344 192 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 AL117339.3-201ENST00000418733 162 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 CYCSP4-201ENST00000429682 331 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 HMGN2P21-201ENST00000447764 270 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 FCF1P4-201ENST00000448326 183 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 RNU6-612P-201ENST00000516909 102 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 SNORA31.19-201ENST00000517079 126 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 RNU6-897P-201ENST00000517135 105 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 MIR5701-3-201ENST00000578890 82 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 MIR5701-1-201ENST00000585138 82 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 AL109918.3-201ENST00000603072 338 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 MIR5701-2-201ENST00000615634 82 ntBASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PRPF40BQ6NWY9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 AC116096.1-201ENST00000566804 2314 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.26-201ENST00000362539 101 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 RNA5SP50-201ENST00000363731 107 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 SNORA7.2-201ENST00000364446 145 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.477-201ENST00000384352 108 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 MIR708-201ENST00000390708 88 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 SNORA48.2-201ENST00000390926 124 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 AL603908.1-201ENST00000406098 201 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.592-201ENST00000410274 109 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 NDUFB4P7-201ENST00000423198 363 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 SNORD105B-201ENST00000458770 79 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 KC877373.1-201ENST00000479066 408 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 RPL32P34-201ENST00000486380 400 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 Y_RNA.680-201ENST00000516441 93 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 AC004024.1-201ENST00000549244 247 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 MIR5696-201ENST00000578474 85 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 AC008962.1-201ENST00000605729 304 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.66□□□□□ -1.66
PRPF40BQ6NWY9 MTND5P6-201ENST00000422338 1798 ntBASIC4.65□□□□□ -1.66
PRPF40BQ6NWY9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.65□□□□□ -1.66
PRPF40BQ6NWY9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
PRPF40BQ6NWY9 RNU1-76P-201ENST00000362903 159 ntBASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 RNA5SP494-201ENST00000410653 129 ntBASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 AL356535.1-201ENST00000440335 398 ntBASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 ANP32BP2-201ENST00000454525 545 ntBASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 HMGB1P35-201ENST00000503360 598 ntBASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 AC034114.1-201ENST00000520293 285 ntBASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 AP003733.2-201ENST00000529409 171 ntBASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 MIR8058-201ENST00000615737 89 ntBASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 AC141273.2-201ENST00000618989 130 ntBASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 MIR4727-201ENST00000622232 55 ntBASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PRPF40BQ6NWY9 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 AC007390.2-201ENST00000606229 3803 ntBASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.64□□□□□ -1.67
PRPF40BQ6NWY9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms