Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 RPS4XP13-201ENST00000483219 789 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 AC073073.1-201ENST00000493920 463 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 RNU6-1234P-201ENST00000516877 103 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 RNA5SP34-201ENST00000516887 130 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 ATP5J2P6-201ENST00000565203 266 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 MIR3136-201ENST00000583498 78 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 TUG1_4.1-201ENST00000619464 181 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 MIR6837-201ENST00000620884 64 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 MIR8080-201ENST00000622224 89 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 AC112200.1-201ENST00000625015 234 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 MIR3658-201ENST00000636291 56 ntBASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDPF1Q6NVV7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AC010329.5-201ENST00000623497 2174 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 RNU1-19P-201ENST00000363306 165 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 Y_RNA.172-201ENST00000363765 102 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 SNORA74A-201ENST00000364089 198 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 RNU6-454P-201ENST00000364292 107 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 RN7SKP124-201ENST00000364730 341 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 RNU1-64P-201ENST00000365443 163 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 SNORA20-201ENST00000384662 132 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 MIR513A2-201ENST00000385249 127 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 SNORA26.5-201ENST00000391215 123 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 BX510359.3-201ENST00000422168 306 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 RPS26P2-201ENST00000440331 348 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 TPT1P12-201ENST00000448968 492 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 SNRPGP5-201ENST00000456003 220 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 Y_RNA.686-201ENST00000516548 134 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AC069240.1-201ENST00000548774 375 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AC087783.2-201ENST00000605070 562 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AC100827.5-201ENST00000615883 426 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 SCN1A-220ENST00000641603 12506 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AC023421.1-201ENST00000590535 1785 ntBASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC3.81□□□□□ -1.8
CDPF1Q6NVV7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AC002543.1-201ENST00000299783 1954 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 RNU6-199P-201ENST00000362954 107 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 Y_RNA.287-201ENST00000364853 94 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 Y_RNA.420-201ENST00000384043 110 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 Y_RNA.542-201ENST00000384641 111 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 PTMAP5-201ENST00000393073 333 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 MIR208B-201ENST00000401172 77 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AL135790.2-201ENST00000437701 267 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AC000111.2-201ENST00000448200 210 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 YWHAEP4-201ENST00000505390 198 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 Vault.1-201ENST00000516474 102 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AC109810.1-201ENST00000534066 224 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AC021739.1-201ENST00000559631 174 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 MIR4489-201ENST00000578869 62 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AC011487.3-201ENST00000593607 453 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 GMFG-212ENST00000602185 423 ntTSL 3 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 MIR6730-201ENST00000622213 67 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AC134026.1-201ENST00000623249 2239 ntBASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDPF1Q6NVV7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.79□□□□□ -1.8
CDPF1Q6NVV7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDPF1Q6NVV7 FAM35BP-202ENST00000497389 3337 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms