Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AC005476.1-201ENST00000554427 397 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 TRAV28-201ENST00000557548 323 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AC005046.1-201ENST00000608515 625 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AC078938.1-201ENST00000620993 318 ntBASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USPL1Q5W0Q7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 Y_RNA.14-201ENST00000362415 103 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 Y_RNA.471-201ENST00000384312 102 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 RNU2-68P-201ENST00000410878 191 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 AC004552.1-201ENST00000419089 348 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 RPL39P38-201ENST00000467018 153 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 RPS26P3-201ENST00000470205 348 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 RN7SL601P-201ENST00000471221 293 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 AC090543.2-201ENST00000483963 348 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 AC004057.1-201ENST00000485827 348 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 RNU6-377P-201ENST00000515965 102 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 SNORA70.16-201ENST00000516390 95 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 AC103996.1-201ENST00000555468 102 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 AC007390.2-201ENST00000606229 3803 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 MIR8058-201ENST00000615737 89 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 AC138627.2-201ENST00000624202 601 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 SCARNA4-202ENST00000625402 129 ntBASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USPL1Q5W0Q7 IPO8P1-201ENST00000455509 3109 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 RNU6-227P-201ENST00000362865 103 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 SNORD50.1-201ENST00000362987 71 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 Y_RNA.483-201ENST00000384380 101 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 Y_RNA.515-201ENST00000384535 112 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 RPS29P13-201ENST00000402041 169 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 AC098614.2-201ENST00000426040 255 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 AC092798.1-201ENST00000458542 409 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 RPS29P2-201ENST00000479278 136 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 RNA5SP208-201ENST00000516156 78 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 Y_RNA.713-201ENST00000517013 96 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 RNA5SP165-201ENST00000517142 115 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 AL137849.1-201ENST00000604767 169 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 LINC00901.1-201ENST00000617252 152 ntBASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USPL1Q5W0Q7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC018555.1-201ENST00000567548 1980 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC118273.1-201ENST00000525324 3006 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 Y_RNA.27-201ENST00000362540 103 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 SNORA20.1-201ENST00000364790 130 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 U3.13-201ENST00000364804 214 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 RNU5E-7P-201ENST00000365290 117 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 RNU2-64P-201ENST00000411315 191 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 TOMM22P1-201ENST00000418578 312 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC007560.1-201ENST00000426912 237 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 PIGFP3-201ENST00000441918 722 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC124916.1-201ENST00000444020 547 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC009237.8-201ENST00000445492 379 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 HIGD1AP2-201ENST00000446367 280 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC079354.2-201ENST00000453523 154 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 KC877373.1-201ENST00000479066 408 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 RPL32P34-201ENST00000486380 400 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC078817.1-201ENST00000492623 435 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC078918.1-201ENST00000498515 228 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC025465.3-201ENST00000510570 311 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 SNORA70.18-201ENST00000516696 98 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 RNU6-572P-201ENST00000516724 80 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 MIR2355-201ENST00000517199 87 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC104581.2-201ENST00000572227 430 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 AC099506.2-201ENST00000623074 221 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 U4.7-201ENST00000638126 106 ntBASIC4.69□□□□□ -1.66
USPL1Q5W0Q7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms