Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS53Q5VIR6 SNORA63-201ENST00000363450 132 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 RNU6-371P-201ENST00000364283 108 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS53Q5VIR6 MIR483-201ENST00000385070 76 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 snosnR66.1-201ENST00000391095 99 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 MIR450B-201ENST00000401182 78 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 RNA5SP274-201ENST00000410484 108 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS53Q5VIR6 MTCO2P27-201ENST00000420740 428 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 AC091390.3-201ENST00000426478 338 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS53Q5VIR6 MTND1P17-201ENST00000448961 204 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 AL135752.1-201ENST00000479477 471 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 MTND5P5-201ENST00000503764 376 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VPS53Q5VIR6 MTND4LP22-201ENST00000508209 276 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.61□□□□□ -1.83
VPS53Q5VIR6 RNU6-559P-201ENST00000516151 98 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 RNU6-273P-201ENST00000516937 96 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS53Q5VIR6 COPS8P3-201ENST00000526024 482 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS53Q5VIR6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS53Q5VIR6 DNAJC8P1-201ENST00000554535 372 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.61□□□□□ -1.83
VPS53Q5VIR6 FRG2DP-202ENST00000566967 323 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 MIR5692A1-201ENST00000580523 69 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 MIR5692C1-201ENST00000585309 91 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 APOOP1-201ENST00000604695 592 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 AL162274.2-201ENST00000614406 332 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 AC073308.1-201ENST00000623696 305 ntBASIC3.61□□□□□ -1.83
VPS53Q5VIR6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 UBE2L2-201ENST00000254302 429 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 SNORD116-11-201ENST00000383882 92 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 Y_RNA.394-201ENST00000383942 103 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 RNU6-128P-201ENST00000383976 107 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 Y_RNA.480-201ENST00000384364 102 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 SNORA48.5-201ENST00000391143 135 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 AF228730.4-201ENST00000421457 183 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 AC092047.1-201ENST00000424997 240 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 MTCO2P12-201ENST00000427426 682 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 CYCSP32-201ENST00000440548 321 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 MTCYBP6-201ENST00000441810 138 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 PIGFP3-201ENST00000441918 722 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 RPS15AP34-201ENST00000487776 387 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 RN7SL283P-201ENST00000489055 303 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 SNORA74D-201ENST00000516404 141 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 RN7SKP272-201ENST00000516988 232 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 IMMP1LP2-201ENST00000552954 492 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 AC007151.1-201ENST00000572774 483 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 MIR4790-201ENST00000577799 79 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 MIR4325-201ENST00000583049 90 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 AL138726.1-201ENST00000614873 333 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 MTND5P19-201ENST00000424872 1794 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.6□□□□□ -1.83
VPS53Q5VIR6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.6□□□□□ -1.83
VPS53Q5VIR6 ZNF519P1-201ENST00000449011 1626 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS53Q5VIR6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
VPS53Q5VIR6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS53Q5VIR6 RNU6-1167P-201ENST00000363227 94 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 RNU6-799P-201ENST00000363567 107 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 Y_RNA.259-201ENST00000364619 101 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS53Q5VIR6 RPL37P10-201ENST00000412884 288 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 SNAP23P1-201ENST00000433229 246 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 FABP5P14-201ENST00000437273 393 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 RPL32P28-201ENST00000443577 397 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AL118496.2-201ENST00000448300 230 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 KC877373.1-201ENST00000479066 408 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 RN7SL633P-201ENST00000488974 297 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AL160314.1-201ENST00000490836 438 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AC009901.1-201ENST00000506703 541 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS53Q5VIR6 RNU6-928P-201ENST00000516876 104 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 RNA5SP471-201ENST00000516971 106 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AP005597.4-201ENST00000526762 229 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AP005639.2-201ENST00000527592 928 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AC138761.3-201ENST00000579993 334 ntBASIC3.59□□□□□ -1.83
VPS53Q5VIR6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms